Pseudomonas sp. phDV1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. phDV1 is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and stability. The genome of Pseudomonas sp. phDV1 is accessible through the accession number NZ_CP031606.1, which allows for further exploration of its genetic and functional potential. The genus Pseudomonas is known for its metabolic versatility, often thriving in diverse environments, including soil, water, and as opportunistic pathogens in plants and animals. The specific ecological role of Pseudomonas sp. phDV1 is not detailed in the provided data; however, its classification within this genus suggests potential capabilities in biogeochemical processes, such as nutrient cycling and biodegradation. The presence of a single replicon can imply a certain level of adaptability and ecological resilience, as it may enhance the organism's ability to respond to environmental changes. This trait could be advantageous for survival in fluctuating conditions typical of the habitats where Pseudomonas species are found. In summary, Pseudomonas sp. phDV1, with its single replicon featured in accession NZ_CP031606.1, exemplifies the ecological adaptability and metabolic diversity associated with the Pseudomonas genus, highlighting its potential role in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. phDV1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. phDV1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. phDV1 chromosome, complete genome.

Gene Summary

Adenine Count

891049 bp

Thymine Count

891004 bp

Guanine Count

1470843 bp

Cytosine Count

1474786 bp

Genome Length

4727682 bp

Protein-coding Genes

4421 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxygen-dependent coproporphyrinogen oxidaseDZC76_RS00290Not AvailablePositive66824 - 6773834560.5
shikimate dehydrogenaseDZC76_RS00295Not AvailablePositive67883 - 6870429157.0
dopa 4,5-dioxygenase family proteinDZC76_RS00300Not AvailablePositive68711 - 6906113516.2
sulp family inorganic anion transporterDZC76_RS00305Not AvailableNegative69084 - 7065556591.7
choline abc transporter substrate-binding proteinDZC76_RS00310Not AvailableNegative70714 - 7163432952.1
choline-sulfataseDZC76_RS00315Not AvailableNegative71858 - 7336657278.0
choline sulfate utilization transcriptional regulatorDZC76_RS00320Not AvailablePositive73480 - 7438533785.7
d-alanyl-d-alanine endopeptidaseDZC76_RS00325Not AvailablePositive74498 - 7540032590.8
is110 family transposaseDZC76_RS00330Not AvailableNegative75911 - 7692738035.3
lysr family transcriptional regulatorDZC76_RS00335Not AvailableNegative77044 - 7793733167.9

Displaying genes 61 – 70 of 4503 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.