Pseudomonas sp. phDV1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. phDV1 is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and stability. The genome of Pseudomonas sp. phDV1 is accessible through the accession number NZ_CP031606.1, which allows for further exploration of its genetic and functional potential. The genus Pseudomonas is known for its metabolic versatility, often thriving in diverse environments, including soil, water, and as opportunistic pathogens in plants and animals. The specific ecological role of Pseudomonas sp. phDV1 is not detailed in the provided data; however, its classification within this genus suggests potential capabilities in biogeochemical processes, such as nutrient cycling and biodegradation. The presence of a single replicon can imply a certain level of adaptability and ecological resilience, as it may enhance the organism's ability to respond to environmental changes. This trait could be advantageous for survival in fluctuating conditions typical of the habitats where Pseudomonas species are found. In summary, Pseudomonas sp. phDV1, with its single replicon featured in accession NZ_CP031606.1, exemplifies the ecological adaptability and metabolic diversity associated with the Pseudomonas genus, highlighting its potential role in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. phDV1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. phDV1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. phDV1 chromosome, complete genome.

Gene Summary

Adenine Count

891049 bp

Thymine Count

891004 bp

Guanine Count

1470843 bp

Cytosine Count

1474786 bp

Genome Length

4727682 bp

Protein-coding Genes

4421 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate aminotransferase family proteinDZC76_RS00240Not AvailablePositive56181 - 5755749222.2
tetratricopeptide repeat proteinDZC76_RS00245Not AvailableNegative57820 - 5813411389.6
trk system potassium transporter trkaDZC76_RS00250Not AvailableNegative58258 - 5963150220.5
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbDZC76_RS00255Not AvailableNegative59793 - 6110047503.4
methionyl-trna formyltransferaseDZC76_RS00260Not AvailableNegative61097 - 6204133258.1
peptide deformylaseDZC76_RS00265Not AvailableNegative62095 - 6260119353.3
lysm peptidoglycan-binding domain-containing proteinDZC76_RS00270Not AvailablePositive62755 - 6379238076.6
dna-processing protein dpraDZC76_RS00275Not AvailablePositive63874 - 6498938781.7
l-threonylcarbamoyladenylate synthaseDZC76_RS00280Not AvailablePositive65067 - 6562420661.7
nadph:quinone reductaseDZC76_RS00285Not AvailableNegative65699 - 6667634293.9

Displaying genes 51 – 60 of 4503 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.