Pseudomonas sp. phDV1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. phDV1 is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and stability. The genome of Pseudomonas sp. phDV1 is accessible through the accession number NZ_CP031606.1, which allows for further exploration of its genetic and functional potential. The genus Pseudomonas is known for its metabolic versatility, often thriving in diverse environments, including soil, water, and as opportunistic pathogens in plants and animals. The specific ecological role of Pseudomonas sp. phDV1 is not detailed in the provided data; however, its classification within this genus suggests potential capabilities in biogeochemical processes, such as nutrient cycling and biodegradation. The presence of a single replicon can imply a certain level of adaptability and ecological resilience, as it may enhance the organism's ability to respond to environmental changes. This trait could be advantageous for survival in fluctuating conditions typical of the habitats where Pseudomonas species are found. In summary, Pseudomonas sp. phDV1, with its single replicon featured in accession NZ_CP031606.1, exemplifies the ecological adaptability and metabolic diversity associated with the Pseudomonas genus, highlighting its potential role in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. phDV1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. phDV1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. phDV1 chromosome, complete genome.

Gene Summary

Adenine Count

891049 bp

Thymine Count

891004 bp

Guanine Count

1470843 bp

Cytosine Count

1474786 bp

Genome Length

4727682 bp

Protein-coding Genes

4421 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxamine 5'-phosphate oxidase family proteinDZC76_RS00140Not AvailablePositive34375 - 3498322384.9
lysophospholipid acyltransferaseDZC76_RS00145Not AvailablePositive35038 - 3592532631.9
flavin reductase family proteinDZC76_RS00150Not AvailablePositive36053 - 363199576.72
bifunctional lysylphosphatidylglycerol flippase/synthetase mprfDZC76_RS00155Not AvailablePositive36440 - 3907694401.8
virulence factor family proteinDZC76_RS00160Not AvailablePositive39078 - 4033144866.2
ectoine/hydroxyectoine abc transporter atp-binding protein ehuaDZC76_RS00165Not AvailableNegative40447 - 4122628578.9
ectoine/hydroxyectoine abc transporter permease subunit ehudDZC76_RS00170Not AvailableNegative41268 - 4193024563.6
ectoine/hydroxyectoine abc transporter permease subunit ehucDZC76_RS00175Not AvailableNegative41927 - 4258624273.8
ectoine/hydroxyectoine abc transporter substrate-binding protein ehubDZC76_RS00180Not AvailableNegative42651 - 4349629908.5
plp-dependent aminotransferase family proteinDZC76_RS00185Not AvailablePositive43743 - 4514052175.7

Displaying genes 31 – 40 of 4503 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.