Dickeya dianthicola strain ME23

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya dianthicola strain ME23 is a Gram-negative, rod-shaped bacterium that exhibits facultative aerobic and anaerobic growth characteristics. This strain thrives optimally at a temperature of 37.0°C, suggesting a preference for moderate to warm environments, which may align with conditions found in certain host organisms or specific ecological niches. As a member of the Dickeya genus, which is known for its association with plant environments, strain ME23's metabolic versatility allows it to adapt to varying oxygen availability, potentially influencing its role in diverse biological interactions. The rod shape of Dickeya dianthicola strain ME23 is characteristic of many bacteria within its lineage, contributing to its motility and ability to colonize different habitats. Its Gram-negative status indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, which may provide insights into its environmental resilience and interactions with other microbial communities. Given its facultative lifestyle, Dickeya dianthicola strain ME23 may play a role in nutrient cycling and organic matter decomposition within its ecological context. Its ability to thrive under varying oxygen conditions suggests that it could contribute to the dynamics of microbial communities in both aerobic and anaerobic environments, highlighting its potential significance in soil health and plant growth promotion.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya dianthicola
Strainstrain ME23

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya dianthicola strain ME23


Gene Summary

Adenine Count

1085047 bp

Thymine Count

1088772 bp

Guanine Count

1363170 bp

Cytosine Count

1372069 bp

Genome Length

4909058 bp

Protein-coding Genes

4177 genes

Non-Coding Genes

302 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+836791 - 836802Not Available
Cp4-57 prophageDZA65_RS03940Not Available-836899 - 83748221337.8
type iv toxin-antitoxin system abiei family antitoxinDZA65_RS03945Not Available+837784 - 83832920825.8
nucleotidyl transferase abieii/abigii toxin family proteinDZA65_RS03950Not Available+838313 - 83923034914.9
hypothetical proteinDZA65_RS03955Not Available-839469 - 84006222960.4
Dna primaseDZA65_RS03960Not Available-840311 - 84263584786.9
hypothetical proteinDZA65_RS03965Not Available-842646 - 8428587749.21
Putative ci repressorDZA65_RS03970Not Available-842851 - 8430487335.0
Putative antirepressorDZA65_RS03975Not Available-843081 - 84339511085.4
hypothetical proteinDZA65_RS22805Not Available-843403 - 8435495085.95

Displaying genes 1 – 10 of 4479 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites