Helicobacter pylori strain GD63

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain GD63 is a Gram-negative, microaerophilic bacterium known for its spiral shape (spirilla) and presence of flagella. This strain is characterized by a single-cell arrangement and is non-motile. It is mesophilic, with an optimal growth temperature of 37°C, and has two replicons and two membranes, which are typical features of bacteria in this genus. Strain GD63 is associated primarily with various hosts, including Homo sapiens (humans), Gallus gallus (chickens), Aves (birds), Primates, Mammalia, Amoeba, Rodentia, Cricetinae, and Thais. This wide range of hosts highlights its adaptability and potential for cross-species transmission. The health implications of H. pylori strain GD63 are significant, as it is linked to a variety of gastrointestinal diseases. These include chronic gastric inflammation, peptic ulcer disease, gastric ulcers, and various forms of gastric cancer, including adenocarcinoma and mucosa-associated lymphoid tissue lymphoma. Additionally, it contributes to chronic gastritis and conditions like gastroesophageal reflux disease (GERD) and functional dyspepsia. The strain can induce an asymptomatic mucosal inflammatory response, leading to severe health consequences for affected individuals. The pathogenicity of H. pylori strain GD63 emphasizes its role in human health and disease, underlining the importance of understanding its biology and ecological relationships. Its presence in diverse hosts may contribute to the bacterium's persistence in various environments and its potential impact on gastrointestinal health across species.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain GD63

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain GD63
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain GD63 plasmid pHPGD63, complete

Gene Summary

Adenine Count

2946 bp

Thymine Count

3031 bp

Guanine Count

1508 bp

Cytosine Count

1490 bp

Genome Length

8975 bp

Protein-coding Genes

7 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tolc family proteinDZC36_RS03450Not AvailableNegative681024 - 68305074836.1
3-deoxy-d-manno-octulosonic acid hydrolase subunit 1DZC36_RS03455Not AvailableNegative683056 - 68361021130.7
exo-alpha-sialidaseDZC36_RS03460Not AvailableNegative683617 - 68473542935.3
tolc family proteinDZC36_RS03465Not AvailableNegative684711 - 68572937966.4
tolc family proteinDZC36_RS03470Not AvailableNegative685733 - 68669536892.4
hypothetical proteinDZC36_RS03475Not AvailableNegative686679 - 68756032898.3
flagellar motor switch protein flinDZC36_RS03480Not AvailableNegative687557 - 68792813956.8
endonuclease iiiDZC36_RS03485Not AvailableNegative688012 - 68866224440.8
feoa family proteinDZC36_RS03490Not AvailableNegative688665 - 6888958709.7
duf3971 domain-containing proteinDZC36_RS03495Not AvailableNegative688892 - 691831111065.0

Displaying genes 671 – 680 of 1523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total