Paraburkholderia caffeinilytica strain CF1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caffeinilytica strain CF1 is a rod-shaped bacterium notable for its motility, as indicated by the presence of flagella. This strain is characterized by having a single replicon, which suggests a streamlined genomic organization that may be advantageous for efficient replication and adaptation in various environments. The genomic sequence for this strain is documented under the accession NZ_CP031466.1. The ecological significance of Paraburkholderia caffeinilytica strain CF1 lies in its potential role in the degradation of caffeine and other related compounds. This capability may allow it to thrive in environments where these substances are present, thereby contributing to bioremediation processes. By breaking down complex organic compounds, this strain could play a vital role in maintaining ecological balance and promoting soil health. Overall, the traits of Paraburkholderia caffeinilytica strain CF1 highlight its potential functional importance in microbial ecosystems, particularly in relation to organic matter decomposition and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caffeinilytica
Strainstrain CF1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caffeinilytica strain CF1 chromosome 1, complete

Gene Summary

Adenine Count

682727 bp

Thymine Count

688599 bp

Guanine Count

1122829 bp

Cytosine Count

1124892 bp

Genome Length

3619047 bp

Protein-coding Genes

3110 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
entericidin a/b family lipoproteinDSC91_RS13780Not AvailableNegative3124110 - 31242685586.87
3-isopropylmalate dehydratase large subunitDSC91_RS13785Not AvailableNegative3124274 - 312568350769.8
citrate synthaseDSC91_RS13790Not AvailableNegative3126061 - 312736248361.1
succinate dehydrogenase assembly factor 2DSC91_RS13795Not AvailableNegative3127464 - 312773910675.7
succinate dehydrogenase iron-sulfur subunitDSC91_RS13800Not AvailableNegative3127741 - 312844526833.3
succinate dehydrogenase flavoprotein subunitDSC91_RS13805Not AvailableNegative3128470 - 313024564747.0
succinate dehydrogenase, hydrophobic membrane anchor proteinDSC91_RS13810Not AvailableNegative3130250 - 313061814008.4
succinate dehydrogenase, cytochrome b556 subunitDSC91_RS13815Not AvailableNegative3130623 - 313103915349.3
gntr family transcriptional regulatorDSC91_RS13820Not AvailableNegative3131197 - 313199729458.1
malate dehydrogenaseDSC91_RS13825Not AvailablePositive3132502 - 313348535087.2

Displaying genes 2731 – 2740 of 3163 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.