Paraburkholderia caffeinilytica strain CF1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caffeinilytica strain CF1 is a rod-shaped bacterium notable for its motility, as indicated by the presence of flagella. This strain is characterized by having a single replicon, which suggests a streamlined genomic organization that may be advantageous for efficient replication and adaptation in various environments. The genomic sequence for this strain is documented under the accession NZ_CP031466.1. The ecological significance of Paraburkholderia caffeinilytica strain CF1 lies in its potential role in the degradation of caffeine and other related compounds. This capability may allow it to thrive in environments where these substances are present, thereby contributing to bioremediation processes. By breaking down complex organic compounds, this strain could play a vital role in maintaining ecological balance and promoting soil health. Overall, the traits of Paraburkholderia caffeinilytica strain CF1 highlight its potential functional importance in microbial ecosystems, particularly in relation to organic matter decomposition and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caffeinilytica
Strainstrain CF1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caffeinilytica strain CF1 chromosome 1, complete

Gene Summary

Adenine Count

682727 bp

Thymine Count

688599 bp

Guanine Count

1122829 bp

Cytosine Count

1124892 bp

Genome Length

3619047 bp

Protein-coding Genes

3110 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr/acrr family transcriptional regulatorDSC91_RS12160Not AvailableNegative2740829 - 274153326683.7
arsr/smtb family transcription factorDSC91_RS12165Not AvailableNegative2741628 - 274193011295.7
sdr family oxidoreductaseDSC91_RS12170Not AvailableNegative2742038 - 274277825231.2
carboxymuconolactone decarboxylase family proteinDSC91_RS38010Not AvailableNegative2742827 - 274323414195.0
cytochrome p450DSC91_RS12175Not AvailableNegative2743257 - 274448945875.2
ferredoxinDSC91_RS12180Not AvailableNegative2744534 - 27447287061.36
fad-dependent oxidoreductaseDSC91_RS38015Not AvailableNegative2744853 - 274702777481.9
flavin-containing monooxygenaseDSC91_RS12190Not AvailableNegative2747024 - 274870662323.8
alpha/beta hydrolaseDSC91_RS12195Not AvailableNegative2748727 - 274979737872.1
sdr family nad(p)-dependent oxidoreductaseDSC91_RS12200Not AvailableNegative2749872 - 275064826843.4

Displaying genes 2411 – 2420 of 3163 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.