Paraburkholderia caffeinilytica strain CF1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caffeinilytica strain CF1 is a rod-shaped bacterium notable for its motility, as indicated by the presence of flagella. This strain is characterized by having a single replicon, which suggests a streamlined genomic organization that may be advantageous for efficient replication and adaptation in various environments. The genomic sequence for this strain is documented under the accession NZ_CP031466.1. The ecological significance of Paraburkholderia caffeinilytica strain CF1 lies in its potential role in the degradation of caffeine and other related compounds. This capability may allow it to thrive in environments where these substances are present, thereby contributing to bioremediation processes. By breaking down complex organic compounds, this strain could play a vital role in maintaining ecological balance and promoting soil health. Overall, the traits of Paraburkholderia caffeinilytica strain CF1 highlight its potential functional importance in microbial ecosystems, particularly in relation to organic matter decomposition and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caffeinilytica
Strainstrain CF1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caffeinilytica strain CF1 chromosome 1, complete

Gene Summary

Adenine Count

682727 bp

Thymine Count

688599 bp

Guanine Count

1122829 bp

Cytosine Count

1124892 bp

Genome Length

3619047 bp

Protein-coding Genes

3110 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporterDSC91_RS11455Not AvailablePositive2569106 - 257045547417.5
aspartate/glutamate racemase family proteinDSC91_RS11460Not AvailablePositive2570543 - 257133727873.6
dienelactone hydrolase family proteinDSC91_RS11465Not AvailableNegative2571408 - 257264645558.8
lysr family transcriptional regulatorDSC91_RS11470Not AvailablePositive2572746 - 257365434126.5
benzoate diol dehydrogenase bendDSC91_RS11475Not AvailableNegative2573767 - 257454326885.1
benzoate 1,2-dioxygenase electron transfer component bencDSC91_RS11480Not AvailableNegative2574540 - 257556236663.4
benzoate 1,2-dioxygenase small subunitDSC91_RS11485Not AvailableNegative2575601 - 257608919353.6
rieske 2fe-2s domain-containing proteinDSC91_RS11490Not AvailableNegative2576086 - 257744451235.4
catechol 1,2-dioxygenaseDSC91_RS11495Not AvailableNegative2577557 - 257849233769.0
lysr family transcriptional regulatorDSC91_RS11500Not AvailablePositive2578669 - 257959235250.9

Displaying genes 2271 – 2280 of 3163 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.