Paraburkholderia caffeinilytica strain CF1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caffeinilytica strain CF1 is a rod-shaped bacterium notable for its motility, as indicated by the presence of flagella. This strain is characterized by having a single replicon, which suggests a streamlined genomic organization that may be advantageous for efficient replication and adaptation in various environments. The genomic sequence for this strain is documented under the accession NZ_CP031466.1. The ecological significance of Paraburkholderia caffeinilytica strain CF1 lies in its potential role in the degradation of caffeine and other related compounds. This capability may allow it to thrive in environments where these substances are present, thereby contributing to bioremediation processes. By breaking down complex organic compounds, this strain could play a vital role in maintaining ecological balance and promoting soil health. Overall, the traits of Paraburkholderia caffeinilytica strain CF1 highlight its potential functional importance in microbial ecosystems, particularly in relation to organic matter decomposition and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caffeinilytica
Strainstrain CF1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caffeinilytica strain CF1 chromosome 1, complete

Gene Summary

Adenine Count

682727 bp

Thymine Count

688599 bp

Guanine Count

1122829 bp

Cytosine Count

1124892 bp

Genome Length

3619047 bp

Protein-coding Genes

3110 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobalamin biosynthesis proteinDSC91_RS07540Not AvailablePositive1697837 - 169838818613.9
cob(i)yrinic acid a,c-diamide adenosyltransferaseDSC91_RS07545Not AvailablePositive1698385 - 169898722297.8
cobyrinate a,c-diamide synthaseDSC91_RS07550Not AvailablePositive1698991 - 170028945851.1
5,6-dimethylbenzimidazole synthaseDSC91_RS07555Not AvailablePositive1700273 - 170093224905.1
duf4136 domain-containing proteinDSC91_RS07560Not AvailableNegative1700955 - 170159022655.8
chase2 domain-containing proteinDSC91_RS07565Not AvailableNegative1701587 - 170411891121.7
fecr domain-containing proteinDSC91_RS07570Not AvailableNegative1704185 - 170554648693.4
response regulator transcription factorDSC91_RS07575Not AvailableNegative1705636 - 170637327307.0
dead/deah box helicaseDSC91_RS07580Not AvailableNegative1706957 - 1710484130743.0
deor/glpr family dna-binding transcription regulatorDSC91_RS07585Not AvailableNegative1710694 - 171147327650.3

Displaying genes 1501 – 1510 of 3163 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.