Pseudomonas fluorescens strain SIK_W1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain SIK_W1 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is a heterotrophic organism, relying on organic compounds as its energy source, and it thrives in aerobic conditions, necessitating the presence of oxygen for optimal growth. The optimal growth temperature for strain SIK_W1 is 25.0°C, indicating a preference for moderate environmental conditions. Pseudomonas fluorescens species are known for their metabolic versatility, which allows them to inhabit a wide range of environments. This adaptability suggests that strain SIK_W1 may be found in diverse habitats, likely contributing to its ecological role in various ecosystems. The ability of this strain to utilize multiple organic substrates enhances its potential utility in bioremediation processes, where it may play a role in the degradation of pollutants. Additionally, the isolation of Pseudomonas fluorescens strains from different environments has implications for understanding microbial community dynamics and nutrient cycling. The presence of strain SIK_W1 in various habitats may indicate its capacity to adapt to different ecological niches, making it a subject of interest for further studies on microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain SIK_W1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain SIK_W1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas fluorescens strain SIK_W1


Gene Summary

Adenine Count

1296839 bp

Thymine Count

1305899 bp

Guanine Count

2093865 bp

Cytosine Count

2094484 bp

Genome Length

6791087 bp

Protein-coding Genes

5964 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1309583 - 1309598Not Available
Putative mismatch repair proteinDXV65_RS05965Not Available-1314059 - 131665095854.3
serine hydrolase domain-containing proteinDXV65_RS05970Not Available-1316861 - 131800642241.6
fatty acid desaturaseDXV65_RS05975Not Available-1318064 - 131913140880.0
ResolvaseDXV65_RS05980Not Available+1319444 - 132000421195.3
Putative cro/ci transcriptional regulatorDXV65_RS05985Not Available+1320155 - 132089827997.2
phage holin family proteinDXV65_RS05990Not Available+1321500 - 132184412145.0
Putative phage-related proteinDXV65_RS05995Not Available+1321866 - 132238118287.6
Putative baseplate assembly protein vDXV65_RS06000Not Available+1322385 - 132299621491.4
Putative baseplate assembly proteinDXV65_RS06005Not Available+1323006 - 132333812094.5

Displaying genes 1 – 10 of 6074 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites