Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fluorescens |
| Strain | strain SIK_W1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1296839 bp
Thymine Count
1305899 bp
Guanine Count
2093865 bp
Cytosine Count
2094484 bp
Genome Length
6791087 bp
Protein-coding Genes
5964 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system-associated fha domain protein tagh | DXV65_RS30380 | Not Available | Negative | 6647342 - 6648670 | 48654.6 |
| type vi secretion system protein tssa | DXV65_RS30385 | Not Available | Positive | 6649066 - 6650085 | 36853.4 |
| type vi secretion system contractile sheath small subunit | DXV65_RS30390 | Not Available | Positive | 6650140 - 6650646 | 18403.2 |
| type vi secretion system contractile sheath large subunit | DXV65_RS30395 | Not Available | Positive | 6650649 - 6652145 | 55700.5 |
| hcp family type vi secretion system effector | DXV65_RS30400 | Not Available | Positive | 6652330 - 6652818 | 17517.9 |
| type vi secretion system baseplate subunit tsse | DXV65_RS30405 | Not Available | Positive | 6652897 - 6653412 | 18875.6 |
| type vi secretion system baseplate subunit tssf | DXV65_RS30410 | Not Available | Positive | 6653409 - 6655268 | 69107.6 |
| type vi secretion system baseplate subunit tssg | DXV65_RS30415 | Not Available | Positive | 6655232 - 6656275 | 39178.1 |
| type vi secretion system atpase tssh | DXV65_RS30420 | Not Available | Positive | 6656268 - 6658925 | 97023.6 |
| type vi secretion system vgr family protein | DXV65_RS30425 | Not Available | Positive | 6659053 - 6660993 | 72413.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






