Pseudomonas fluorescens strain SIK_W1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain SIK_W1 is a Gram-negative, rod-shaped bacterium known for its heterotrophic lifestyle, utilizing organic compounds as its energy source. This strain is characterized by its aerobic nature, requiring oxygen for growth, and exhibits mobility due to the presence of flagella. The cell arrangement is primarily in singles, indicating that these bacteria do not typically form clusters or chains. P. fluorescens strain SIK_W1 thrives optimally at a temperature of 25°C, positioning it within the mesophilic temperature range, which is conducive to growth in diverse environments. This strain has a single replicon and is surrounded by two membranes, typical of Gram-negative bacteria. In terms of ecological impact, Pseudomonas fluorescens strains, including SIK_W1, are often found in a variety of habitats, contributing to nutrient cycling and soil health. Their free-living nature allows them to play significant roles in biodegradation and bioremediation processes. Overall, the adaptability and ecological roles of Pseudomonas fluorescens suggest its importance in various biotic relationships and environmental interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain SIK_W1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain SIK_W1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas fluorescens strain SIK_W1 chromosome, complete genome.

Gene Summary

Adenine Count

1296839 bp

Thymine Count

1305899 bp

Guanine Count

2093865 bp

Cytosine Count

2094484 bp

Genome Length

6791087 bp

Protein-coding Genes

5964 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l6DXV65_RS27795Not AvailableNegative6115665 - 611619819198.2
30s ribosomal protein s8DXV65_RS27800Not AvailableNegative6116211 - 611660314093.3
30s ribosomal protein s14DXV65_RS27805Not AvailableNegative6116812 - 611711711435.2
50s ribosomal protein l5DXV65_RS27810Not AvailableNegative6117131 - 611767020458.1
50s ribosomal protein l24DXV65_RS27815Not AvailableNegative6117693 - 611800711345.9
50s ribosomal protein l14DXV65_RS27820Not AvailableNegative6118019 - 611838713410.7
30s ribosomal protein s17DXV65_RS27825Not AvailableNegative6118411 - 611867710097.3
50s ribosomal protein l29DXV65_RS27830Not AvailableNegative6118680 - 61188717172.78
50s ribosomal protein l16DXV65_RS27835Not AvailableNegative6118871 - 611928415432.2
30s ribosomal protein s3DXV65_RS27840Not AvailableNegative6119297 - 611998325754.5

Displaying genes 5441 – 5450 of 6074 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.