Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fluorescens |
| Strain | strain SIK_W1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1296839 bp
Thymine Count
1305899 bp
Guanine Count
2093865 bp
Cytosine Count
2094484 bp
Genome Length
6791087 bp
Protein-coding Genes
5964 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssg | DXV65_RS17270 | Not Available | Negative | 3875254 - 3876261 | 37746.7 |
| type vi secretion system baseplate subunit tssf | DXV65_RS17275 | Not Available | Negative | 3876225 - 3878012 | 67392.4 |
| type vi secretion system baseplate subunit tsse | DXV65_RS17280 | Not Available | Negative | 3878002 - 3878403 | 14556.8 |
| type vi secretion system contractile sheath large subunit | DXV65_RS17285 | Not Available | Negative | 3878418 - 3879893 | 55451.7 |
| type vi secretion system contractile sheath small subunit | DXV65_RS17290 | Not Available | Negative | 3879922 - 3880419 | 18084.0 |
| type vi secretion system protein tssa | DXV65_RS17295 | Not Available | Negative | 3880452 - 3882005 | 59345.2 |
| hcp family type vi secretion system effector | DXV65_RS17300 | Not Available | Positive | 3882484 - 3882999 | 19052.3 |
| aldo/keto reductase | DXV65_RS17305 | Not Available | Negative | 3883052 - 3883873 | 30133.2 |
| duf1543 domain-containing protein | DXV65_RS17310 | Not Available | Positive | 3883980 - 3884474 | 18478.1 |
| polyamine abc transporter substrate-binding protein | DXV65_RS17315 | Not Available | Positive | 3884579 - 3885679 | 40054.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






