Halapricum salinum strain CBA1105

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloarculaceae

Genus

Halapricum

Description

Halapricum salinum strain CBA1105 is characterized by having a single replicon, which is significant for its genetic structure and stability. This strain is cataloged under the accession number NZ_CP031310.1, allowing for its identification and further study within genomic databases. The presence of a single replicon suggests a streamlined genetic architecture, which can impact its adaptability and evolutionary processes. In microbial ecology, such simplicity can facilitate rapid responses to environmental changes, as the organism may allocate resources more efficiently than those with multiple replicons. The ecological niche occupied by Halapricum salinum may be linked to its metabolic capabilities and resilience in various environments, particularly those with high salinity. Understanding the genetic framework of strain CBA1105 can provide insights into its role in microbial communities, especially in saline ecosystems where it may influence nutrient cycling and interactions with other microorganisms. Overall, the genetic characteristics and accession identification of Halapricum salinum strain CBA1105 highlight its potential significance in microbial ecology and its adaptability to extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloarculaceae
GenusHalapricum
SpeciesHalapricum salinum
Strainstrain CBA1105

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halapricum salinum strain CBA1105 chromosome, complete genome.

Gene Summary

Adenine Count

625806 bp

Thymine Count

626127 bp

Guanine Count

1100669 bp

Cytosine Count

1099454 bp

Genome Length

3452056 bp

Protein-coding Genes

3423 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf5796 family proteinDV733_RS03850Not AvailableNegative787337 - 78776215426.9
pkd domain-containing proteinDV733_RS03855Not AvailablePositive788160 - 794474212582.0
shikimate kinaseDV733_RS03860Not AvailablePositive794553 - 79543130353.2
chorismate mutaseDV733_RS03865Not AvailablePositive795389 - 79569411714.5
hypothetical proteinDV733_RS03870Not AvailableNegative795701 - 7959559318.82
tram domain-containing proteinDV733_RS03875Not AvailableNegative796127 - 79652214483.7
ykgj family cysteine cluster proteinDV733_RS03880Not AvailableNegative796619 - 79729324609.9
mbl fold metallo-hydrolaseDV733_RS03885Not AvailableNegative797330 - 79810027051.7
helix-turn-helix domain-containing proteinDV733_RS03890Not AvailableNegative798100 - 79837810505.4
class i sam-dependent methyltransferaseDV733_RS03895Not AvailablePositive798635 - 79933926455.4

Displaying genes 791 – 800 of 3476 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.