Halapricum salinum strain CBA1105

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloarculaceae

Genus

Halapricum

Description

Halapricum salinum strain CBA1105 is characterized by having a single replicon, which is significant for its genetic structure and stability. This strain is cataloged under the accession number NZ_CP031310.1, allowing for its identification and further study within genomic databases. The presence of a single replicon suggests a streamlined genetic architecture, which can impact its adaptability and evolutionary processes. In microbial ecology, such simplicity can facilitate rapid responses to environmental changes, as the organism may allocate resources more efficiently than those with multiple replicons. The ecological niche occupied by Halapricum salinum may be linked to its metabolic capabilities and resilience in various environments, particularly those with high salinity. Understanding the genetic framework of strain CBA1105 can provide insights into its role in microbial communities, especially in saline ecosystems where it may influence nutrient cycling and interactions with other microorganisms. Overall, the genetic characteristics and accession identification of Halapricum salinum strain CBA1105 highlight its potential significance in microbial ecology and its adaptability to extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloarculaceae
GenusHalapricum
SpeciesHalapricum salinum
Strainstrain CBA1105

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halapricum salinum strain CBA1105 chromosome, complete genome.

Gene Summary

Adenine Count

625806 bp

Thymine Count

626127 bp

Guanine Count

1100669 bp

Cytosine Count

1099454 bp

Genome Length

3452056 bp

Protein-coding Genes

3423 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abrb/maze/spovt family dna-binding domain-containing proteinDV733_RS15610Not AvailablePositive3171139 - 31714029761.39
type ii toxin-antitoxin system pemk/mazf family toxinDV733_RS15615Not AvailablePositive3171408 - 317176413116.5
replication factor c large subunitDV733_RS15620Not AvailablePositive3171817 - 317330153247.1
pas domain-containing proteinDV733_RS15625Not AvailableNegative3173326 - 317517067273.0
methylmalonyl-coa epimeraseDV733_RS15630Not AvailableNegative3175284 - 317567314247.7
duf2892 domain-containing proteinDV733_RS15635Not AvailablePositive3175748 - 31759787856.93
methylmalonyl-coa mutaseDV733_RS15640Not AvailableNegative3175985 - 317766461733.5
had family hydrolaseDV733_RS15645Not AvailablePositive3177749 - 317841724009.8
gnat family n-acetyltransferaseDV733_RS15650Not AvailableNegative3178455 - 317903621830.2
lactate racemase domain-containing proteinDV733_RS15655Not AvailablePositive3179138 - 318035542469.6

Displaying genes 3201 – 3210 of 3476 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.