Halapricum salinum strain CBA1105

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloarculaceae

Genus

Halapricum

Description

Halapricum salinum strain CBA1105 is characterized by having a single replicon, which is significant for its genetic structure and stability. This strain is cataloged under the accession number NZ_CP031310.1, allowing for its identification and further study within genomic databases. The presence of a single replicon suggests a streamlined genetic architecture, which can impact its adaptability and evolutionary processes. In microbial ecology, such simplicity can facilitate rapid responses to environmental changes, as the organism may allocate resources more efficiently than those with multiple replicons. The ecological niche occupied by Halapricum salinum may be linked to its metabolic capabilities and resilience in various environments, particularly those with high salinity. Understanding the genetic framework of strain CBA1105 can provide insights into its role in microbial communities, especially in saline ecosystems where it may influence nutrient cycling and interactions with other microorganisms. Overall, the genetic characteristics and accession identification of Halapricum salinum strain CBA1105 highlight its potential significance in microbial ecology and its adaptability to extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloarculaceae
GenusHalapricum
SpeciesHalapricum salinum
Strainstrain CBA1105

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halapricum salinum strain CBA1105 chromosome, complete genome.

Gene Summary

Adenine Count

625806 bp

Thymine Count

626127 bp

Guanine Count

1100669 bp

Cytosine Count

1099454 bp

Genome Length

3452056 bp

Protein-coding Genes

3423 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent epimerase/dehydratase family proteinDV733_RS15560Not AvailableNegative3160798 - 316178436046.3
glycosyltransferaseDV733_RS15565Not AvailableNegative3161815 - 316275335491.3
pqq-binding-like beta-propeller repeat proteinDV733_RS15570Not AvailablePositive3162928 - 316423846822.5
nop5/nop56 family proteinDV733_RS15575Not AvailablePositive3164432 - 316528330496.1
fibrillarin-like rrna/trna 2'-o-methyltransferaseDV733_RS15580Not AvailablePositive3165280 - 316591523124.1
glutamate--cysteine ligaseDV733_RS15585Not AvailablePositive3165971 - 316705940972.6
hypothetical proteinDV733_RS15590Not AvailablePositive3167118 - 316781625805.3
duf2237 family proteinDV733_RS15595Not AvailablePositive3167858 - 316823213715.9
hypothetical proteinDV733_RS15600Not AvailableNegative3168410 - 316913825961.2
hypothetical proteinDV733_RS15605Not AvailableNegative3169280 - 317068344939.7

Displaying genes 3191 – 3200 of 3476 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.