Halapricum salinum strain CBA1105

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloarculaceae

Genus

Halapricum

Description

Halapricum salinum strain CBA1105 is characterized by having a single replicon, which is significant for its genetic structure and stability. This strain is cataloged under the accession number NZ_CP031310.1, allowing for its identification and further study within genomic databases. The presence of a single replicon suggests a streamlined genetic architecture, which can impact its adaptability and evolutionary processes. In microbial ecology, such simplicity can facilitate rapid responses to environmental changes, as the organism may allocate resources more efficiently than those with multiple replicons. The ecological niche occupied by Halapricum salinum may be linked to its metabolic capabilities and resilience in various environments, particularly those with high salinity. Understanding the genetic framework of strain CBA1105 can provide insights into its role in microbial communities, especially in saline ecosystems where it may influence nutrient cycling and interactions with other microorganisms. Overall, the genetic characteristics and accession identification of Halapricum salinum strain CBA1105 highlight its potential significance in microbial ecology and its adaptability to extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloarculaceae
GenusHalapricum
SpeciesHalapricum salinum
Strainstrain CBA1105

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halapricum salinum strain CBA1105 chromosome, complete genome.

Gene Summary

Adenine Count

625806 bp

Thymine Count

626127 bp

Guanine Count

1100669 bp

Cytosine Count

1099454 bp

Genome Length

3452056 bp

Protein-coding Genes

3423 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylanthranilate isomeraseDV733_RS12210Not AvailablePositive2486759 - 248739422020.7
anthranilate synthase component iDV733_RS12215Not AvailablePositive2487391 - 248901358269.4
anthranilate synthase component iiDV733_RS12220Not AvailablePositive2489010 - 248969924328.0
endo-1,3-alpha-glucanase family glycosylhydrolaseDV733_RS12225Not AvailablePositive2489756 - 249149863243.5
intein-containing adenosylcobalamin-dependent ribonucleoside-diphosphate reductaseDV733_RS12230Not AvailablePositive2491916 - 2496154156783.0
hypothetical proteinDV733_RS12235Not AvailableNegative2496180 - 249648211049.0
winged helix-turn-helix domain-containing proteinDV733_RS12240Not AvailableNegative2496489 - 249676410778.6
molybdopterin-dependent oxidoreductaseDV733_RS12245Not AvailableNegative2496829 - 249834953188.3
hvo_2523 family zinc finger proteinDV733_RS17820Not AvailablePositive2498469 - 24985884608.55
pas domain s-box proteinDV733_RS12250Not AvailablePositive2498646 - 250114492345.5

Displaying genes 2501 – 2510 of 3476 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.