Halapricum salinum strain CBA1105

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloarculaceae

Genus

Halapricum

Description

Halapricum salinum strain CBA1105 is characterized by having a single replicon, which is significant for its genetic structure and stability. This strain is cataloged under the accession number NZ_CP031310.1, allowing for its identification and further study within genomic databases. The presence of a single replicon suggests a streamlined genetic architecture, which can impact its adaptability and evolutionary processes. In microbial ecology, such simplicity can facilitate rapid responses to environmental changes, as the organism may allocate resources more efficiently than those with multiple replicons. The ecological niche occupied by Halapricum salinum may be linked to its metabolic capabilities and resilience in various environments, particularly those with high salinity. Understanding the genetic framework of strain CBA1105 can provide insights into its role in microbial communities, especially in saline ecosystems where it may influence nutrient cycling and interactions with other microorganisms. Overall, the genetic characteristics and accession identification of Halapricum salinum strain CBA1105 highlight its potential significance in microbial ecology and its adaptability to extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloarculaceae
GenusHalapricum
SpeciesHalapricum salinum
Strainstrain CBA1105

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halapricum salinum strain CBA1105 chromosome, complete genome.

Gene Summary

Adenine Count

625806 bp

Thymine Count

626127 bp

Guanine Count

1100669 bp

Cytosine Count

1099454 bp

Genome Length

3452056 bp

Protein-coding Genes

3423 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m23 family metallopeptidaseDV733_RS10805Not AvailableNegative2161859 - 216334953053.3
helix-turn-helix domain-containing proteinDV733_RS10810Not AvailablePositive2163459 - 216439433915.2
response regulator transcription factorDV733_RS10815Not AvailableNegative2164383 - 216496722135.8
winged helix-turn-helix domain-containing proteinDV733_RS10820Not AvailablePositive2165147 - 216550012991.9
pas domain-containing proteinDV733_RS10825Not AvailablePositive2165654 - 216728856455.4
atp-binding proteinDV733_RS10830Not AvailablePositive2167285 - 216891657297.8
bacterio-opsin activator domain-containing proteinDV733_RS10835Not AvailableNegative2168924 - 217043854451.3
sensor histidine kinaseDV733_RS10840Not AvailableNegative2170457 - 217144935302.3
hypothetical proteinDV733_RS10845Not AvailableNegative2171617 - 217214118362.0
hypothetical proteinDV733_RS10850Not AvailableNegative2172236 - 217357046809.5

Displaying genes 2211 – 2220 of 3476 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.