Halapricum salinum strain CBA1105

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloarculaceae

Genus

Halapricum

Description

Halapricum salinum strain CBA1105 is characterized by having a single replicon, which is significant for its genetic structure and stability. This strain is cataloged under the accession number NZ_CP031310.1, allowing for its identification and further study within genomic databases. The presence of a single replicon suggests a streamlined genetic architecture, which can impact its adaptability and evolutionary processes. In microbial ecology, such simplicity can facilitate rapid responses to environmental changes, as the organism may allocate resources more efficiently than those with multiple replicons. The ecological niche occupied by Halapricum salinum may be linked to its metabolic capabilities and resilience in various environments, particularly those with high salinity. Understanding the genetic framework of strain CBA1105 can provide insights into its role in microbial communities, especially in saline ecosystems where it may influence nutrient cycling and interactions with other microorganisms. Overall, the genetic characteristics and accession identification of Halapricum salinum strain CBA1105 highlight its potential significance in microbial ecology and its adaptability to extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloarculaceae
GenusHalapricum
SpeciesHalapricum salinum
Strainstrain CBA1105

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halapricum salinum strain CBA1105 chromosome, complete genome.

Gene Summary

Adenine Count

625806 bp

Thymine Count

626127 bp

Guanine Count

1100669 bp

Cytosine Count

1099454 bp

Genome Length

3452056 bp

Protein-coding Genes

3423 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavodoxin domain-containing proteinDV733_RS10070Not AvailableNegative2006650 - 200722520456.5
archaeal proteasome endopeptidase complex subunit betaDV733_RS10075Not AvailablePositive2007400 - 200812525187.3
duf998 domain-containing proteinDV733_RS10080Not AvailablePositive2008210 - 200884221652.1
hypothetical proteinDV733_RS10085Not AvailablePositive2008897 - 200927713140.5
hypothetical proteinDV733_RS10090Not AvailableNegative2009294 - 200995323850.5
lrp/asnc family transcriptional regulatorDV733_RS10095Not AvailableNegative2010828 - 201124115174.7
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitDV733_RS10100Not AvailablePositive2011344 - 201239037731.2
type iv pilinDV733_RS10105Not AvailablePositive2012642 - 201313317377.8
type iv pilinDV733_RS10110Not AvailablePositive2013126 - 201360816743.4
amidohydrolase family proteinDV733_RS10115Not AvailablePositive2013650 - 201451332678.7

Displaying genes 2061 – 2070 of 3476 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.