Escherichia coli strain EC17GD31

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain EC17GD31 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic lifestyle, allowing it to thrive in both oxygen-rich and oxygen-poor environments. This strain is motile, possessing flagella, and typically arranges itself in pairs or singles. Optimal growth occurs at 37°C, classifying it as a mesophilic organism. The ecological niche of EC17GD31 is primarily host-associated, with a wide range of hosts that includes Homo sapiens, various domestic animals such as Gallus gallus and Bos taurus, as well as several species in the Metazoa and other taxa. This suggests a versatile adaptation to diverse biological environments. EC17GD31 is implicated in numerous health effects, particularly in humans, where it is associated with urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). These associations highlight its pathogenic potential, especially in clinical settings. The strain contains two replicons and two membranes, which are characteristic of Gram-negative bacteria, further supporting its classification within this group. Given its wide array of potential pathogenic effects on various hosts, EC17GD31 illustrates the significance of E. coli strains in both health and disease. Its presence in a diverse range of species underlines the interconnectedness of microbial life and the potential for cross-species transmission of infections, highlighting the importance of monitoring such strains in both clinical and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain EC17GD31

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain EC17GD31
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain EC17GD31


Gene Summary

Adenine Count

1232855 bp

Thymine Count

1232397 bp

Guanine Count

1257098 bp

Cytosine Count

1253482 bp

Genome Length

4975832 bp

Protein-coding Genes

4515 genes

Non-Coding Genes

289 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bile acid:sodium symporter family proteinDWB25_RS00515Not AvailablePositive105169 - 10647947015.9
glcg/hbps family heme-binding proteinDWB25_RS00520Not AvailablePositive106515 - 10693415009.4
aspartate/glutamate racemase family proteinDWB25_RS00525Not AvailablePositive106931 - 10758123511.0
hypothetical proteinDWB25_RS00530Not AvailableNegative108175 - 1083757780.81
Is21 transposaseDWB25_RS28280Not AvailableNegative108395 - 10879814254.8
incfii family plasmid replication initiator repaDWB25_RS28285Not AvailableNegative108782 - 1088803435.14
hypothetical proteinDWB25_RS00540Not AvailableNegative109220 - 10989126050.0
sdr family oxidoreductaseDWB25_RS00545Not AvailablePositive109984 - 11075627680.4
Putative multiple stress resistance proteinDWB25_RS00550Not AvailablePositive110898 - 1111498797.47
Hypothetical proteinDWB25_RS00555Not AvailablePositive111206 - 11154113245.2

Displaying genes 11 – 20 of 5024 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total