Streptomyces paludis strain GSSD-12

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces paludis strain GSSD-12 is characterized by the presence of flagella, which suggests a potential for motility. This trait may contribute to its ability to navigate its environment, potentially aiding in colonization and interaction with other microbial communities. The strain possesses a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and stability of its genomic information. The strain is cataloged under accession number NZ_CP031194.1, which provides a reference for researchers interested in studying its genetic and functional attributes. The genomic data associated with this accession can offer insights into the metabolic pathways and biosynthetic capabilities of S. paludis GSSD-12, particularly in the context of producing bioactive compounds, a hallmark of the genus Streptomyces. In a broader ecological context, the presence of flagella in S. paludis GSSD-12 may allow it to occupy diverse niches within its habitat, potentially influencing soil health and nutrient cycling. This capability could play a role in the degradation of organic matter and the promotion of plant growth, highlighting the ecological importance of this strain within its microbial community. Understanding these traits can provide valuable insights into the functional roles of Streptomyces species in various environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces paludis
Strainstrain GSSD-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces paludis strain GSSD-12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces paludis strain GSSD-12 chromosome, complete genome.

Gene Summary

Adenine Count

1211316 bp

Thymine Count

1224741 bp

Guanine Count

3020754 bp

Cytosine Count

2998041 bp

Genome Length

8454852 bp

Protein-coding Genes

7061 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolase 5 family proteinDVK44_RS29925Not AvailablePositive6752927 - 675420446236.9
alpha-mannosidaseDVK44_RS29930Not AvailablePositive6754277 - 6757297109606.0
rna polymerase sigma factor sigfDVK44_RS29935Not AvailableNegative6757383 - 675827332660.1
4a-hydroxytetrahydrobiopterin dehydrataseDVK44_RS29940Not AvailablePositive6758421 - 675872910874.0
aldo/keto reductaseDVK44_RS29945Not AvailableNegative6758822 - 675965229860.5
amp-dependent synthetase/ligaseDVK44_RS29950Not AvailableNegative6759761 - 676156064599.4
nramp family divalent metal transporterDVK44_RS29955Not AvailableNegative6761718 - 676344861535.8
magnesium transporter mgte n-terminal domain-containing proteinDVK44_RS29960Not AvailableNegative6763445 - 676473747212.2
lysr substrate-binding domain-containing proteinDVK44_RS29965Not AvailableNegative6764842 - 676574732579.2
bile acid:sodium symporter family proteinDVK44_RS29970Not AvailablePositive6765918 - 676701537795.1

Displaying genes 5961 – 5970 of 7178 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.