Streptomyces paludis strain GSSD-12

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces paludis strain GSSD-12 is characterized by the presence of flagella, which suggests a potential for motility. This trait may contribute to its ability to navigate its environment, potentially aiding in colonization and interaction with other microbial communities. The strain possesses a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and stability of its genomic information. The strain is cataloged under accession number NZ_CP031194.1, which provides a reference for researchers interested in studying its genetic and functional attributes. The genomic data associated with this accession can offer insights into the metabolic pathways and biosynthetic capabilities of S. paludis GSSD-12, particularly in the context of producing bioactive compounds, a hallmark of the genus Streptomyces. In a broader ecological context, the presence of flagella in S. paludis GSSD-12 may allow it to occupy diverse niches within its habitat, potentially influencing soil health and nutrient cycling. This capability could play a role in the degradation of organic matter and the promotion of plant growth, highlighting the ecological importance of this strain within its microbial community. Understanding these traits can provide valuable insights into the functional roles of Streptomyces species in various environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces paludis
Strainstrain GSSD-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces paludis strain GSSD-12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces paludis strain GSSD-12 chromosome, complete genome.

Gene Summary

Adenine Count

1211316 bp

Thymine Count

1224741 bp

Guanine Count

3020754 bp

Cytosine Count

2998041 bp

Genome Length

8454852 bp

Protein-coding Genes

7061 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
redox-sensing transcriptional repressor rexDVK44_RS12970Not AvailableNegative2965999 - 296682328005.4
glutaredoxin family proteinDVK44_RS12975Not AvailableNegative2967189 - 296746710602.5
had family hydrolaseDVK44_RS12980Not AvailablePositive2967628 - 296857534078.6
ecf subfamily rna polymerase sigma factor, bldn familyDVK44_RS12985Not AvailablePositive2968892 - 296968928917.3
duf5667 domain-containing proteinDVK44_RS12990Not AvailablePositive2969947 - 297118542864.0
lysophospholipid acyltransferase family proteinDVK44_RS12995Not AvailableNegative2971308 - 297236638191.1
nad-dependent epimerase/dehydratase family proteinDVK44_RS13000Not AvailableNegative2972359 - 297346238686.4
30s ribosomal protein bs22DVK44_RS13005Not AvailableNegative2973641 - 29737394045.35
helix-turn-helix domain-containing proteinDVK44_RS13010Not AvailableNegative2973850 - 29740627811.56
phosphataseDVK44_RS13015Not AvailableNegative2974191 - 297500628715.4

Displaying genes 2631 – 2640 of 7178 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.