Stenotrophomonas sp. ASS1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas sp. ASS1 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This motility can play a significant role in its ecological interactions, allowing it to navigate through various environments, including soil and water. The organism is noted for having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation to diverse conditions. The genomic data for Stenotrophomonas sp. ASS1 can be accessed under the accession number NZ_CP031167.1, which provides a resource for further genetic and functional studies. Stenotrophomonas species are often associated with plant and soil environments, where they can participate in nutrient cycling and potentially contribute to plant health. The motility provided by flagella may enhance their ability to colonize different habitats and engage in symbiotic or antagonistic relationships with other microorganisms. Understanding the ecological role of Stenotrophomonas sp. ASS1 within its environment can shed light on its potential applications in biotechnology and agriculture, particularly in promoting plant growth or biocontrol of pathogens.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas sp. ASS1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas sp. ASS1 chromosome, complete genome.

Gene Summary

Adenine Count

766034 bp

Thymine Count

768334 bp

Guanine Count

1516903 bp

Cytosine Count

1513210 bp

Genome Length

4564481 bp

Protein-coding Genes

4033 genes

Non-Coding Genes

132 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubieMG068_RS17950Not AvailableNegative3886511 - 388727227991.6
nucleoside deaminaseMG068_RS17955Not AvailablePositive3887353 - 388780516513.4
hypothetical proteinMG068_RS17960Not AvailablePositive3888005 - 38882659645.64
hypothetical proteinMG068_RS17965Not AvailablePositive3888340 - 388866612499.8
low affinity iron permease family proteinMG068_RS17970Not AvailablePositive3888743 - 388916515605.7
multidrug efflux rnd transporter outer membrane subunit smefMG068_RS17975Not AvailableNegative3889308 - 389070850022.3
multidrug efflux rnd transporter permease subunit smeeMG068_RS17980Not AvailableNegative3890819 - 3893941111394.0
multidrug efflux rnd transporter periplasmic adaptor subunit smedMG068_RS17985Not AvailableNegative3893954 - 389513840813.9
efflux transporter smedef transcriptional repressor smetMG068_RS17990Not AvailablePositive3895366 - 389602524568.7
gfo/idh/moca family proteinMG068_RS17995Not AvailablePositive3896071 - 389706335564.3

Displaying genes 3561 – 3570 of 4165 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.