Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CFSAN064035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CFSAN064035 plasmid pGMI17-003, complete
Gene Summary
Adenine Count
8726 bp
Thymine Count
9569 bp
Guanine Count
3445 bp
Cytosine Count
3706 bp
Genome Length
25446 bp
Protein-coding Genes
36 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | C6669_RS29930 | Not Available | Positive | 58394 - 58683 | 10812.1 |
| hypothetical protein | C6669_RS28465 | Not Available | Positive | 58750 - 58932 | 7053.73 |
| Putative recombinase xerd | C6669_RS28470 | Not Available | Positive | 59053 - 59793 | 28193.5 |
| Putative replication protein repa | C6669_RS28475 | Not Available | Negative | 60078 - 61055 | 37286.0 |
| Putative transposase orfb | C6669_RS28485 | Not Available | Negative | 61851 - 62264 | 15974.7 |
| Conserved protein of unknown function pdcb | C6669_RS28490 | Not Available | Negative | 62269 - 62547 | 10600.9 |
| Pdca | C6669_RS28495 | Not Available | Negative | 62575 - 62754 | 6748.57 |
| Toxin doc | C6669_RS28500 | Not Available | Negative | 62759 - 63139 | 13616.1 |
| Prevention of host death by doc toxicity | C6669_RS28505 | Not Available | Negative | 63139 - 63360 | 8133.53 |
| Putative restriction-modification protein | C6669_RS28510 | Not Available | Positive | 63543 - 65099 | 57764.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





