Escherichia coli strain CFSAN064035

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain CFSAN064035 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. It is a facultative anaerobe, thriving optimally at 37°C within a mesophilic temperature range. This strain is characterized by its ability to exist in pairs or as singles and possesses two replicons and two membranes. CFSAN064035 is host-associated and is known to inhabit a diverse range of hosts, including Homo sapiens (humans), Gallus gallus (domestic chickens), Bos taurus (cattle), and various other mammals, birds, and even some plants like Solanum lycopersicum (tomatoes) and Brassica oleracea var. italica (broccoli). The biotic relationship of this strain is categorized as free-living, indicating its adaptability to various environments. This strain is notably pathogenic to humans, associated with a wide array of health effects. These include urinary tract infections (UTIs), gastrointestinal infections, septicemia, and complications such as hemolytic uremic syndrome (HUS) and neonatal meningitis. The extensive list of potential health impacts underscores its significance in clinical microbiology, particularly concerning foodborne infections and enteric diseases. The ecological insight from the diverse host range of CFSAN064035 suggests its role as a significant pathogen in both human health and animal agriculture. The strain's adaptability to various hosts and environments highlights the importance of surveillance and control measures in mitigating its impact on public health and veterinary medicine.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain CFSAN064035

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain CFSAN064035
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain CFSAN064035 plasmid pGMI17-003, complete

Gene Summary

Adenine Count

8726 bp

Thymine Count

9569 bp

Guanine Count

3445 bp

Cytosine Count

3706 bp

Genome Length

25446 bp

Protein-coding Genes

36 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cpbp family intramembrane glutamic endopeptidaseC6669_RS28180Not AvailablePositive22700 - 2335324308.9
type ii toxin-antitoxin system antitoxin pemiC6669_RS29340Not AvailablePositive23446 - 237039333.16
type ii toxin-antitoxin system pemk/mazf family toxinC6669_RS28185Not AvailablePositive23636 - 2403714823.2
duf262 domain-containing proteinC6669_RS28195Not AvailablePositive24321 - 2563150223.4
type ii toxin-antitoxin system vapc family toxinC6669_RS28200Not AvailablePositive25660 - 257583341.9
broad-spectrum class a beta-lactamase tem-1C6669_RS28205Not AvailableNegative25908 - 2676831517.0
type ii toxin-antitoxin system vapc family toxinC6669_RS28210Not AvailableNegative26951 - 2728912482.0
is6-like element is26 family transposaseC6669_RS28215Not AvailablePositive27353 - 2805727953.9
type ii toxin-antitoxin system vapc family toxinC6669_RS28225Not AvailablePositive28112 - 2852515818.4
type ii toxin-antitoxin system vapc family toxinC6669_RS28230Not AvailableNegative28569 - 2887412624.1

Displaying genes 111 – 120 of 139 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total