Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CFSAN064035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CFSAN064035 plasmid pGMI17-003, complete
Gene Summary
Adenine Count
8726 bp
Thymine Count
9569 bp
Guanine Count
3445 bp
Cytosine Count
3706 bp
Genome Length
25446 bp
Protein-coding Genes
36 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C6669_RS28125 | Not Available | Positive | 16246 - 16458 | 8082.62 |
| type ii toxin-antitoxin system vapc family toxin | C6669_RS28135 | Not Available | Positive | 16971 - 17257 | 11128.7 |
| hok/gef family protein | C6669_RS28140 | Not Available | Positive | 17329 - 17463 | 4897.21 |
| replication regulatory protein repa | C6669_RS28145 | Not Available | Positive | 17760 - 18014 | 9445.5 |
| is21-like element isec12 family helper atpase istb | C6669_RS28150 | Not Available | Negative | 18174 - 18920 | 28348.2 |
| is21-like element isec12 family transposase | C6669_RS28155 | Not Available | Negative | 18935 - 20476 | 59359.5 |
| replication protein repa | C6669_RS30115 | Not Available | Negative | 20617 - 20757 | 5151.41 |
| repa leader peptide tap | C6669_RS28165 | Not Available | Positive | 20838 - 20912 | 2703.37 |
| type ii toxin-antitoxin system vapc family toxin | C6669_RS28170 | Not Available | Positive | 20905 - 21761 | 31387.2 |
| hypothetical protein | C6669_RS29470 | Not Available | Positive | 22462 - 22602 | 4944.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





