Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CFSAN064035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CFSAN064035 plasmid pGMI17-003, complete
Gene Summary
Adenine Count
8726 bp
Thymine Count
9569 bp
Guanine Count
3445 bp
Cytosine Count
3706 bp
Genome Length
25446 bp
Protein-coding Genes
36 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb/repb/spo0j family plasmid partition protein | C6669_RS28060 | Not Available | Positive | 8611 - 9582 | 35318.2 |
| duf1281 domain-containing protein | C6669_RS28075 | Not Available | Positive | 10449 - 11351 | 34085.8 |
| hypothetical protein | C6669_RS28080 | Not Available | Positive | 11348 - 11659 | 11964.3 |
| dna methylase | C6669_RS28085 | Not Available | Positive | 11736 - 12419 | 25556.6 |
| hypothetical protein | C6669_RS28090 | Not Available | Positive | 12420 - 12641 | 8675.34 |
| duf1380 family protein | C6669_RS28095 | Not Available | Positive | 12571 - 13089 | 19458.3 |
| is6-like element is26 family transposase | C6669_RS28105 | Not Available | Negative | 13237 - 13941 | 27953.9 |
| type ii toxin-antitoxin system vapc family toxin | C6669_RS28110 | Not Available | Positive | 14006 - 14734 | 26608.1 |
| conjugal transfer pilus acetylase trax | C6669_RS28115 | Not Available | Positive | 14754 - 15500 | 27282.6 |
| fertility inhibition protein fino | C6669_RS28120 | Not Available | Positive | 15555 - 16115 | 21162.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





