Salicibibacter kimchii strain NKC1-1

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Salicibibacter

Description

Salicibibacter kimchii strain NKC1-1 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP031092.1, which provides a reference for researchers interested in its genetic information and potential applications. As a member of the Salicibibacter genus, this strain is likely associated with specific ecological niches, although detailed habitat information is not provided. The presence of a single replicon suggests a potential advantage in genomic stability and replication efficiency, which can be critical for survival in various environments. Understanding the genetic makeup and traits of Salicibibacter kimchii strain NKC1-1 can contribute to insights into its role in microbial ecosystems, particularly in relation to fermentation processes, given the name's association with kimchi, a traditional fermented food. This strain may play a specialized role in the microbiota associated with fermented products, influencing flavor and preservation. Overall, the genomic characteristics of Salicibibacter kimchii strain NKC1-1 offer a foundation for further investigation into its functional capabilities and ecological interactions within its environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusSalicibibacter
SpeciesSalicibibacter kimchii
Strainstrain NKC1-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salicibibacter kimchii strain NKC1-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salicibibacter kimchii strain NKC1-1 chromosome, complete genome.

Gene Summary

Adenine Count

999979 bp

Thymine Count

997276 bp

Guanine Count

823970 bp

Cytosine Count

820377 bp

Genome Length

3641602 bp

Protein-coding Genes

3592 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription elongation factor greaDT065_RS19250Not AvailableNegative803227 - 8033565021.72
sigma-70 family rna polymerase sigma factorDT065_RS04120Not AvailablePositive804014 - 80453220486.3
transcription elongation factor greaDT065_RS04125Not AvailablePositive804572 - 8047386404.61
tripartite tricarboxylate transporter permeaseDT065_RS04130Not AvailableNegative805056 - 80654952567.1
tripartite tricarboxylate transporter tctb family proteinDT065_RS04135Not AvailableNegative806605 - 80704816734.3
tripartite tricarboxylate transporter substrate binding proteinDT065_RS04140Not AvailableNegative807061 - 80806236533.6
iclr family transcriptional regulatorDT065_RS04145Not AvailablePositive808600 - 80936728341.1
citryl-coa lyaseDT065_RS04150Not AvailablePositive809390 - 81025331419.7
caib/baif coa transferase family proteinDT065_RS04155Not AvailablePositive810395 - 81160944932.6
rraa family proteinDT065_RS04160Not AvailablePositive811880 - 81256024334.3

Displaying genes 861 – 870 of 3742 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.