Salicibibacter kimchii strain NKC1-1

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Salicibibacter

Description

Salicibibacter kimchii strain NKC1-1 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP031092.1, which provides a reference for researchers interested in its genetic information and potential applications. As a member of the Salicibibacter genus, this strain is likely associated with specific ecological niches, although detailed habitat information is not provided. The presence of a single replicon suggests a potential advantage in genomic stability and replication efficiency, which can be critical for survival in various environments. Understanding the genetic makeup and traits of Salicibibacter kimchii strain NKC1-1 can contribute to insights into its role in microbial ecosystems, particularly in relation to fermentation processes, given the name's association with kimchi, a traditional fermented food. This strain may play a specialized role in the microbiota associated with fermented products, influencing flavor and preservation. Overall, the genomic characteristics of Salicibibacter kimchii strain NKC1-1 offer a foundation for further investigation into its functional capabilities and ecological interactions within its environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusSalicibibacter
SpeciesSalicibibacter kimchii
Strainstrain NKC1-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salicibibacter kimchii strain NKC1-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salicibibacter kimchii strain NKC1-1 chromosome, complete genome.

Gene Summary

Adenine Count

999979 bp

Thymine Count

997276 bp

Guanine Count

823970 bp

Cytosine Count

820377 bp

Genome Length

3641602 bp

Protein-coding Genes

3592 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aromatic ring-hydroxylating oxygenase subunit alphaDT065_RS15145Not AvailablePositive2993800 - 299507748966.4
aromatic-ring-hydroxylating dioxygenase subunit betaDT065_RS15150Not AvailablePositive2995074 - 299556218896.5
nad(p)/fad-dependent oxidoreductaseDT065_RS15155Not AvailablePositive2995596 - 299662438083.6
voc family proteinDT065_RS15160Not AvailablePositive2996692 - 299770238721.5
amidohydrolase family proteinDT065_RS15165Not AvailablePositive2997744 - 299876038235.6
indolepyruvate ferredoxin oxidoreductase subunit alphaDT065_RS15170Not AvailablePositive2998789 - 29990228247.57
diaminopropionate ammonia-lyaseDT065_RS15175Not AvailablePositive2999189 - 300032541254.1
4-hydroxyphenylacetate 3-hydroxylase family proteinDT065_RS15180Not AvailablePositive3000611 - 300211656108.9
flavin reductase family proteinDT065_RS15185Not AvailablePositive3002131 - 300261317672.2
fad synthetase family proteinDT065_RS15190Not AvailablePositive3002642 - 300348432252.7

Displaying genes 3071 – 3080 of 3742 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.