Salicibibacter kimchii strain NKC1-1

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Salicibibacter

Description

Salicibibacter kimchii strain NKC1-1 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP031092.1, which provides a reference for researchers interested in its genetic information and potential applications. As a member of the Salicibibacter genus, this strain is likely associated with specific ecological niches, although detailed habitat information is not provided. The presence of a single replicon suggests a potential advantage in genomic stability and replication efficiency, which can be critical for survival in various environments. Understanding the genetic makeup and traits of Salicibibacter kimchii strain NKC1-1 can contribute to insights into its role in microbial ecosystems, particularly in relation to fermentation processes, given the name's association with kimchi, a traditional fermented food. This strain may play a specialized role in the microbiota associated with fermented products, influencing flavor and preservation. Overall, the genomic characteristics of Salicibibacter kimchii strain NKC1-1 offer a foundation for further investigation into its functional capabilities and ecological interactions within its environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusSalicibibacter
SpeciesSalicibibacter kimchii
Strainstrain NKC1-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salicibibacter kimchii strain NKC1-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salicibibacter kimchii strain NKC1-1 chromosome, complete genome.

Gene Summary

Adenine Count

999979 bp

Thymine Count

997276 bp

Guanine Count

823970 bp

Cytosine Count

820377 bp

Genome Length

3641602 bp

Protein-coding Genes

3592 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDT065_RS15095Not AvailableNegative2984753 - 298510012783.5
iclr family transcriptional regulatorDT065_RS15100Not AvailableNegative2985238 - 298603229162.9
aldehyde dehydrogenaseDT065_RS15105Not AvailablePositive2986271 - 298773753761.8
2-keto-4-pentenoate hydrataseDT065_RS15110Not AvailablePositive2987749 - 298854328728.4
acetaldehyde dehydrogenase (acetylating)DT065_RS15115Not AvailablePositive2988562 - 298944931285.7
4-hydroxy-2-oxovalerate aldolaseDT065_RS15120Not AvailablePositive2989465 - 299069443759.6
2-keto-4-pentenoate hydrataseDT065_RS15125Not AvailablePositive2990720 - 299150828572.2
4-oxalocrotonate tautomeraseDT065_RS15130Not AvailablePositive2991554 - 29917456969.41
lysr family transcriptional regulatorDT065_RS15135Not AvailableNegative2991794 - 299268433831.7
sdr family nad(p)-dependent oxidoreductaseDT065_RS15140Not AvailablePositive2992994 - 299377027636.6

Displaying genes 3061 – 3070 of 3742 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.