Salicibibacter kimchii strain NKC1-1

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Salicibibacter

Description

Salicibibacter kimchii strain NKC1-1 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP031092.1, which provides a reference for researchers interested in its genetic information and potential applications. As a member of the Salicibibacter genus, this strain is likely associated with specific ecological niches, although detailed habitat information is not provided. The presence of a single replicon suggests a potential advantage in genomic stability and replication efficiency, which can be critical for survival in various environments. Understanding the genetic makeup and traits of Salicibibacter kimchii strain NKC1-1 can contribute to insights into its role in microbial ecosystems, particularly in relation to fermentation processes, given the name's association with kimchi, a traditional fermented food. This strain may play a specialized role in the microbiota associated with fermented products, influencing flavor and preservation. Overall, the genomic characteristics of Salicibibacter kimchii strain NKC1-1 offer a foundation for further investigation into its functional capabilities and ecological interactions within its environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusSalicibibacter
SpeciesSalicibibacter kimchii
Strainstrain NKC1-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salicibibacter kimchii strain NKC1-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salicibibacter kimchii strain NKC1-1 chromosome, complete genome.

Gene Summary

Adenine Count

999979 bp

Thymine Count

997276 bp

Guanine Count

823970 bp

Cytosine Count

820377 bp

Genome Length

3641602 bp

Protein-coding Genes

3592 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-hydroxyacyl-acp dehydratase fabzDT065_RS10245Not AvailableNegative2014630 - 201507015885.3
dna-directed rna polymerase subunit betaDT065_RS10250Not AvailableNegative2015072 - 20153239423.62
flagellar hook-basal body proteinDT065_RS10255Not AvailableNegative2015334 - 201616129984.1
flagellar hook-basal body proteinDT065_RS10260Not AvailableNegative2016202 - 201702629302.0
rod shape-determining protein mrebDT065_RS10265Not AvailableNegative2017043 - 201804436067.1
threonine/serine dehydrataseDT065_RS10270Not AvailablePositive2018459 - 201940633508.6
llm class flavin-dependent oxidoreductaseDT065_RS10275Not AvailableNegative2020634 - 202162336685.5
sporulation transcriptional regulator spoiiidDT065_RS10280Not AvailableNegative2022313 - 202258210344.5
uracil-dna glycosylaseDT065_RS10285Not AvailableNegative2022993 - 202362223443.6
rna-guided endonuclease insq/tnpb family proteinDT065_RS10290Not AvailablePositive2023843 - 202442422786.5

Displaying genes 2091 – 2100 of 3742 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.