Salicibibacter kimchii strain NKC1-1

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Salicibibacter

Description

Salicibibacter kimchii strain NKC1-1 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP031092.1, which provides a reference for researchers interested in its genetic information and potential applications. As a member of the Salicibibacter genus, this strain is likely associated with specific ecological niches, although detailed habitat information is not provided. The presence of a single replicon suggests a potential advantage in genomic stability and replication efficiency, which can be critical for survival in various environments. Understanding the genetic makeup and traits of Salicibibacter kimchii strain NKC1-1 can contribute to insights into its role in microbial ecosystems, particularly in relation to fermentation processes, given the name's association with kimchi, a traditional fermented food. This strain may play a specialized role in the microbiota associated with fermented products, influencing flavor and preservation. Overall, the genomic characteristics of Salicibibacter kimchii strain NKC1-1 offer a foundation for further investigation into its functional capabilities and ecological interactions within its environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusSalicibibacter
SpeciesSalicibibacter kimchii
Strainstrain NKC1-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salicibibacter kimchii strain NKC1-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salicibibacter kimchii strain NKC1-1 chromosome, complete genome.

Gene Summary

Adenine Count

999979 bp

Thymine Count

997276 bp

Guanine Count

823970 bp

Cytosine Count

820377 bp

Genome Length

3641602 bp

Protein-coding Genes

3592 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
orotate phosphoribosyltransferaseDT065_RS05040Not AvailableNegative994578 - 99522523065.3
orotidine-5'-phosphate decarboxylaseDT065_RS05045Not AvailableNegative995210 - 99593526287.7
dihydroorotate dehydrogenaseDT065_RS05050Not AvailableNegative995932 - 99686432432.1
dihydroorotate dehydrogenase electron transfer subunitDT065_RS05055Not AvailableNegative996861 - 99764027706.4
carbamoyl-phosphate synthase large subunitDT065_RS05060Not AvailableNegative997637 - 1000831117264.0
aspartate carbamoyltransferase catalytic subunitDT065_RS05065Not AvailableNegative1000931 - 100186034165.9
uracil-xanthine permease family proteinDT065_RS05070Not AvailableNegative1001841 - 100319647406.3
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrrDT065_RS05075Not AvailableNegative1003396 - 100393820307.7
rlua family pseudouridine synthaseDT065_RS05080Not AvailableNegative1004633 - 100554734220.0
signal peptidase iiDT065_RS05085Not AvailableNegative1005537 - 100601917925.3

Displaying genes 1051 – 1060 of 3742 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.