Paracoccus yeei strain CCUG 32053

Gram-negativeCocciNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus yeei strain CCUG 32053 is a Gram-negative, non-motile cocci bacterium classified as a chemoheterotroph, indicating that it derives its energy from organic compounds. This strain is an aerobic organism, requiring oxygen for its metabolic processes. It thrives in mesophilic conditions, which suggests that it prefers moderate temperatures typically found in soil environments. The genomic structure of Paracoccus yeei strain CCUG 32053 is characterized by the presence of six replicons, which may play a role in the organism's genetic diversity and adaptability. The strain does not produce spores, indicating a reliance on other survival strategies in its soil habitat. Given its ecological niche, Paracoccus yeei strain CCUG 32053 likely contributes to soil nutrient cycling and organic matter decomposition. As a chemoheterotroph, it aids in breaking down complex organic materials, thus facilitating the availability of nutrients for other organisms within the soil ecosystem. The presence of this bacterium highlights the importance of microbial communities in maintaining soil health and supporting various ecological functions. Accessions associated with this strain include NZ_CP031079.1, NZ_CP031082.1, NZ_CP031083.1, NZ_CP031085.1, NZ_CP031086.1, and NZ_CP031078.1, which provide genetic information for further study and understanding of its role in the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus yeei
Strainstrain CCUG 32053

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Paracoccus yeei strain CCUG 32053
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Gene Summary

Adenine Count

555292 bp

Thymine Count

554124 bp

Guanine Count

1156723 bp

Cytosine Count

1155540 bp

Genome Length

3421679 bp

Protein-coding Genes

3284 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transketolasePY32053_RS16560Not AvailablePositive3340832 - 334283270711.7
class ii fructose-bisphosphate aldolasePY32053_RS16565Not AvailablePositive3342832 - 334391138393.2
form i ribulose bisphosphate carboxylase large subunitPY32053_RS16570Not AvailablePositive3343925 - 334539154060.9
ribulose bisphosphate carboxylase small subunitPY32053_RS16575Not AvailablePositive3345404 - 334579315344.2
cbbx proteinPY32053_RS16580Not AvailablePositive3345886 - 334681234379.0
ribulose-phosphate 3-epimerasePY32053_RS16585Not AvailablePositive3346809 - 334750424389.2
3-deoxy-d-manno-octulosonic acid transferasePY32053_RS16590Not AvailablePositive3347581 - 334878042043.9
duf1178 family proteinPY32053_RS16595Not AvailablePositive3348839 - 334926415918.8
abc transporter atp-binding proteinPY32053_RS16600Not AvailableNegative3349276 - 335004627221.7
feccd family abc transporter permeasePY32053_RS16605Not AvailableNegative3350043 - 335111036604.0

Displaying genes 3361 – 3370 of 4138 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.