Paracoccus yeei strain CCUG 32053

Gram-negativeCocciNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus yeei strain CCUG 32053 is a Gram-negative, non-motile cocci bacterium classified as a chemoheterotroph, indicating that it derives its energy from organic compounds. This strain is an aerobic organism, requiring oxygen for its metabolic processes. It thrives in mesophilic conditions, which suggests that it prefers moderate temperatures typically found in soil environments. The genomic structure of Paracoccus yeei strain CCUG 32053 is characterized by the presence of six replicons, which may play a role in the organism's genetic diversity and adaptability. The strain does not produce spores, indicating a reliance on other survival strategies in its soil habitat. Given its ecological niche, Paracoccus yeei strain CCUG 32053 likely contributes to soil nutrient cycling and organic matter decomposition. As a chemoheterotroph, it aids in breaking down complex organic materials, thus facilitating the availability of nutrients for other organisms within the soil ecosystem. The presence of this bacterium highlights the importance of microbial communities in maintaining soil health and supporting various ecological functions. Accessions associated with this strain include NZ_CP031079.1, NZ_CP031082.1, NZ_CP031083.1, NZ_CP031085.1, NZ_CP031086.1, and NZ_CP031078.1, which provide genetic information for further study and understanding of its role in the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus yeei
Strainstrain CCUG 32053

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Paracoccus yeei strain CCUG 32053
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paracoccus yeei strain CCUG 32053 chromosome, complete genome.

Gene Summary

Adenine Count

555292 bp

Thymine Count

554124 bp

Guanine Count

1156723 bp

Cytosine Count

1155540 bp

Genome Length

3421679 bp

Protein-coding Genes

3284 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lyse family translocatorPY32053_RS14860Not AvailablePositive3008511 - 300914021728.4
pseudouridine synthasePY32053_RS14865Not AvailablePositive3009137 - 300978424178.3
mbl fold metallo-hydrolasePY32053_RS14870Not AvailablePositive3009845 - 301078333070.1
gfa family proteinPY32053_RS14875Not AvailablePositive3010780 - 301121115508.3
trna pseudouridine(55) synthase trubPY32053_RS14880Not AvailableNegative3011198 - 301209431477.6
phosphodiester glycosidase family proteinPY32053_RS14885Not AvailableNegative3012095 - 301285026907.2
30s ribosome-binding factor rbfaPY32053_RS14890Not AvailableNegative3012840 - 301325915603.4
4-hydroxy-tetrahydrodipicolinate reductasePY32053_RS14895Not AvailablePositive3013329 - 301413527668.3
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaePY32053_RS14900Not AvailablePositive3014160 - 301557551142.4
nucleotidyltransferase family proteinPY32053_RS14905Not AvailablePositive3015572 - 301624023602.9

Displaying genes 3021 – 3030 of 4138 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.