Polynucleobacter paneuropaeus strain UB-Kaiv-W7

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Polynucleobacter

Description

Polynucleobacter paneuropaeus strain UB-Kaiv-W7 is characterized as a rod-shaped bacterium. This strain is notable for its single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and survival in various environments. The strain is cataloged under the accession NZ_CP030088.1, which provides a reference for researchers seeking to study its genomic features in detail. The rod shape of Polynucleobacter paneuropaeus is characteristic of many members of the family Planctomycetaceae, to which it belongs, and may play a role in its ecological niche. Understanding the traits of Polynucleobacter paneuropaeus strain UB-Kaiv-W7 can provide insights into its ecological roles, particularly in freshwater systems where members of this genus are often found. Their shape and genetic organization may facilitate interactions with other microorganisms and contribute to biogeochemical cycling in aquatic environments. This strain exemplifies the diversity and specialization within the Polynucleobacter genus, highlighting the importance of studying specific strains to unravel their unique contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPolynucleobacter
SpeciesPolynucleobacter paneuropaeus
Strainstrain UB-Kaiv-W7

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polynucleobacter paneuropaeus strain UB-Kaiv-W7 chromosome.

Gene Summary

Adenine Count

497329 bp

Thymine Count

497297 bp

Guanine Count

415808 bp

Cytosine Count

419174 bp

Genome Length

1830921 bp

Protein-coding Genes

1851 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-pheNot AvailableNot AvailablePositive1812056 - 1812131Not Available
30s ribosomal protein s12 methylthiotransferase accessory factor ycaoDPM18_RS09425Not AvailablePositive1812248 - 181395763994.9
response regulatorDPM18_RS09430Not AvailableNegative1813978 - 181465525170.4
sensor histidine kinaseDPM18_RS09435Not AvailableNegative1814658 - 181696484178.2
duf4390 domain-containing proteinDPM18_RS09440Not AvailableNegative1816973 - 181755421831.2
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbDPM18_RS09445Not AvailableNegative1817551 - 181890949767.9
methionyl-trna formyltransferaseDPM18_RS09450Not AvailableNegative1818851 - 181984035488.7
peptide deformylaseDPM18_RS09455Not AvailableNegative1819850 - 182036519605.9
dna-processing protein dpraDPM18_RS09460Not AvailablePositive1820437 - 182110523358.8
dna topoisomerase iiiDPM18_RS09465Not AvailablePositive1821322 - 182398598230.2

Displaying genes 1891 – 1900 of 1907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.