Polynucleobacter paneuropaeus strain UB-Kaiv-W7

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Polynucleobacter

Description

Polynucleobacter paneuropaeus strain UB-Kaiv-W7 is characterized as a rod-shaped bacterium. This strain is notable for its single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and survival in various environments. The strain is cataloged under the accession NZ_CP030088.1, which provides a reference for researchers seeking to study its genomic features in detail. The rod shape of Polynucleobacter paneuropaeus is characteristic of many members of the family Planctomycetaceae, to which it belongs, and may play a role in its ecological niche. Understanding the traits of Polynucleobacter paneuropaeus strain UB-Kaiv-W7 can provide insights into its ecological roles, particularly in freshwater systems where members of this genus are often found. Their shape and genetic organization may facilitate interactions with other microorganisms and contribute to biogeochemical cycling in aquatic environments. This strain exemplifies the diversity and specialization within the Polynucleobacter genus, highlighting the importance of studying specific strains to unravel their unique contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPolynucleobacter
SpeciesPolynucleobacter paneuropaeus
Strainstrain UB-Kaiv-W7

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polynucleobacter paneuropaeus strain UB-Kaiv-W7 chromosome.

Gene Summary

Adenine Count

497329 bp

Thymine Count

497297 bp

Guanine Count

415808 bp

Cytosine Count

419174 bp

Genome Length

1830921 bp

Protein-coding Genes

1851 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigDPM18_RS06675Not AvailablePositive1292609 - 129330425305.6
had family hydrolaseDPM18_RS06680Not AvailablePositive1293295 - 129397524424.3
Tmrna,resume consensus sequence (at 83): aataactgctaacgacgaNot AvailableNot AvailablePositive1294047 - 1294405Not Available
50s ribosomal protein l11 methyltransferaseDPM18_RS06690Not AvailableNegative1294474 - 129564043241.9
carboxymuconolactone decarboxylase family proteinDPM18_RS06695Not AvailableNegative1295647 - 129618920229.7
tripartite tricarboxylate transporter substrate binding proteinDPM18_RS06700Not AvailableNegative1296198 - 129719634662.4
sulfurtransferaseDPM18_RS06705Not AvailablePositive1297285 - 129805529351.4
antibiotic biosynthesis monooxygenase family proteinDPM18_RS06710Not AvailableNegative1298068 - 129837011480.7
bug family tripartite tricarboxylate transporter substrate binding proteinDPM18_RS06715Not AvailablePositive1298452 - 129944735300.8
mmge/prpd family proteinDPM18_RS06720Not AvailablePositive1299483 - 130085648809.5

Displaying genes 1341 – 1350 of 1907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.