Halorubrum sp. PV6

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. PV6 is a rod-shaped archaeon known for its distinctive adaptations to extreme environments. This organism possesses flagella, which suggests a capability for motility, enabling it to navigate its habitat effectively. Halorubrum sp. PV6 is characterized by having a single replicon, indicating a streamlined genomic organization that may contribute to its survival strategies in harsh conditions. The accession number for this organism is NZ_CP030065.1, which provides a reference for genetic and genomic studies. The presence of flagella implies that Halorubrum sp. PV6 may engage in active movement, potentially allowing it to exploit various niches within its saline or hyper-saline environments. From a biological perspective, the adaptations exhibited by Halorubrum sp. PV6 underscore the resilience of extremophiles in microbial ecosystems. The rod shape may enhance its surface area-to-volume ratio, optimizing nutrient uptake in oligotrophic conditions. The evolutionary significance of these traits suggests that such organisms play a critical role in biogeochemical cycles, particularly in saline environments where they may contribute to the degradation of organic matter and the cycling of nutrients. Overall, Halorubrum sp. PV6 exemplifies the remarkable diversity and adaptability of microbial life in extreme habitats, illustrating the ecological importance of such extremophiles in their respective ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. PV6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. PV6


Gene Summary

Adenine Count

63920 bp

Thymine Count

65362 bp

Guanine Count

86102 bp

Cytosine Count

85390 bp

Genome Length

300774 bp

Protein-coding Genes

306 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iclr family transcriptional regulatorDOS48_RS27930Not AvailablePositive40111 - 4087528396.3
enoyl-coa hydratase/isomerase family proteinDOS48_RS27935Not AvailableNegative41687 - 4249629190.3
3-hydroxyacyl-coa dehydrogenase family proteinDOS48_RS27940Not AvailableNegative42496 - 4338031521.1
thiolase family proteinDOS48_RS27945Not AvailablePositive43478 - 4462040810.0
zinc ribbon domain-containing proteinDOS48_RS27950Not AvailableNegative44622 - 4605849343.5
thiolase domain-containing proteinDOS48_RS27955Not AvailableNegative46055 - 4722740173.6
phenylacetate--coa ligase paakDOS48_RS27960Not AvailablePositive47408 - 4869747858.9
hydroxyphenylacetyl-coa thioesterase paaiDOS48_RS27965Not AvailableNegative48773 - 4917114264.3
maoc/paaz c-terminal domain-containing proteinDOS48_RS27970Not AvailablePositive49263 - 4972417476.4
aldehyde dehydrogenase family proteinDOS48_RS27975Not AvailablePositive49876 - 5133051537.8

Displaying genes 41 – 50 of 306 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.