Halorubrum sp. PV6

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. PV6 is a rod-shaped archaeon known for its distinctive adaptations to extreme environments. This organism possesses flagella, which suggests a capability for motility, enabling it to navigate its habitat effectively. Halorubrum sp. PV6 is characterized by having a single replicon, indicating a streamlined genomic organization that may contribute to its survival strategies in harsh conditions. The accession number for this organism is NZ_CP030065.1, which provides a reference for genetic and genomic studies. The presence of flagella implies that Halorubrum sp. PV6 may engage in active movement, potentially allowing it to exploit various niches within its saline or hyper-saline environments. From a biological perspective, the adaptations exhibited by Halorubrum sp. PV6 underscore the resilience of extremophiles in microbial ecosystems. The rod shape may enhance its surface area-to-volume ratio, optimizing nutrient uptake in oligotrophic conditions. The evolutionary significance of these traits suggests that such organisms play a critical role in biogeochemical cycles, particularly in saline environments where they may contribute to the degradation of organic matter and the cycling of nutrients. Overall, Halorubrum sp. PV6 exemplifies the remarkable diversity and adaptability of microbial life in extreme habitats, illustrating the ecological importance of such extremophiles in their respective ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. PV6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. PV6 plasmid pHrrPV6, complete sequence.

Gene Summary

Adenine Count

63920 bp

Thymine Count

65362 bp

Guanine Count

86102 bp

Cytosine Count

85390 bp

Genome Length

300774 bp

Protein-coding Genes

306 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter permease subunitDOS48_RS28980Not AvailableNegative249502 - 25184783654.7
cog1361 s-layer family proteinDOS48_RS28985Not AvailableNegative251848 - 25350658456.8
sdr family nad(p)-dependent oxidoreductaseDOS48_RS28990Not AvailableNegative253814 - 25419113196.3
para family proteinDOS48_RS28995Not AvailablePositive254369 - 25525032630.0
hypothetical proteinDOS48_RS29000Not AvailablePositive255250 - 25568116007.1
tyrosine-type recombinase/integraseDOS48_RS29005Not AvailableNegative255726 - 25695545592.6
hypothetical proteinDOS48_RS29010Not AvailableNegative257328 - 25900363909.3
halo-cc-star protein hcssDOS48_RS29015Not AvailableNegative259036 - 2592276515.38
halo-cc-star protein hcslDOS48_RS29020Not AvailableNegative259218 - 25958613673.4
arsenical pump-driving atpaseDOS48_RS29025Not AvailableNegative259583 - 26151470531.0

Displaying genes 251 – 260 of 306 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.