Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail protein | DN752_RS24235 | Not Available | Positive | 6236465 - 6236893 | 16528.7 |
| phage tail protein | DN752_RS24240 | Not Available | Positive | 6236902 - 6237363 | 17710.8 |
| duf5908 family protein | DN752_RS24710 | Not Available | Positive | 6237366 - 6237524 | 5714.88 |
| cis tube protein | DN752_RS24245 | Not Available | Positive | 6237528 - 6238214 | 26303.2 |
| type vi secretion system tip protein vgrg | DN752_RS24250 | Not Available | Positive | 6238214 - 6239962 | 62960.1 |
| paar domain-containing protein | DN752_RS24255 | Not Available | Positive | 6240060 - 6240350 | 9377.66 |
| gpw/gp25 family protein | DN752_RS24260 | Not Available | Positive | 6240356 - 6240772 | 15881.9 |
| baseplate j/gp47 family protein | DN752_RS24265 | Not Available | Positive | 6240876 - 6244178 | 125322.0 |
| hypothetical protein | DN752_RS24270 | Not Available | Positive | 6244166 - 6246985 | 108058.0 |
| pkd domain-containing protein | DN752_RS24275 | Not Available | Positive | 6246997 - 6251310 | 161559.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
