Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN752_RS24035 | Not Available | Positive | 6173935 - 6175122 | 45923.5 |
| tlpa disulfide reductase family protein | DN752_RS24040 | Not Available | Positive | 6175438 - 6176544 | 42418.3 |
| ompa family protein | DN752_RS24045 | Not Available | Negative | 6176929 - 6178056 | 42013.1 |
| ompa family protein | DN752_RS24050 | Not Available | Negative | 6178572 - 6179696 | 42000.6 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS24055 | Not Available | Positive | 6180204 - 6183299 | 114535.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS24060 | Not Available | Positive | 6183316 - 6184902 | 59036.1 |
| class i mannose-6-phosphate isomerase | DN752_RS24065 | Not Available | Positive | 6185052 - 6186821 | 67489.5 |
| gh92 family glycosyl hydrolase | DN752_RS24070 | Not Available | Positive | 6186867 - 6190016 | 118083.0 |
| gh36-type glycosyl hydrolase domain-containing protein | DN752_RS24075 | Not Available | Positive | 6190077 - 6191378 | 49378.2 |
| rok family protein | DN752_RS24080 | Not Available | Positive | 6191383 - 6192330 | 33789.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
