Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 105 protein | DN752_RS23985 | Not Available | Positive | 6159742 - 6160926 | 45021.5 |
| glycoside hydrolase family 28 protein | DN752_RS23990 | Not Available | Positive | 6160972 - 6162396 | 52998.3 |
| c40 family peptidase | DN752_RS23995 | Not Available | Negative | 6163416 - 6164591 | 43376.6 |
| amidohydrolase family protein | DN752_RS24000 | Not Available | Negative | 6164661 - 6165962 | 46820.3 |
| amidohydrolase family protein | DN752_RS24005 | Not Available | Negative | 6165998 - 6167374 | 50724.2 |
| amidohydrolase family protein | DN752_RS24010 | Not Available | Negative | 6167386 - 6169053 | 60119.3 |
| response regulator transcription factor | DN752_RS24015 | Not Available | Positive | 6169339 - 6169698 | 13475.6 |
| heat repeat domain-containing protein | DN752_RS24020 | Not Available | Positive | 6169743 - 6171260 | 58547.1 |
| glycosyltransferase family 2 protein | DN752_RS24025 | Not Available | Positive | 6171253 - 6172680 | 54154.9 |
| yaio family outer membrane beta-barrel protein | DN752_RS24030 | Not Available | Positive | 6172703 - 6173935 | 47362.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
