Echinicola strongylocentroti strain MEBiC08714

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Echinicola

Description

Echinicola strongylocentroti strain MEBiC08714 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is classified as a heterotroph, indicating that it obtains its energy from organic compounds. It thrives optimally at a temperature of 25°C and falls within the mesophilic temperature range, which is typically between 20°C and 45°C. The strain possesses a single replicon, which is a defining feature of its genetic structure. The genomic data for Echinicola strongylocentroti strain MEBiC08714 can be accessed under the accession number NZ_CP030041.1. The ecological significance of Echinicola strongylocentroti strain MEBiC08714 can be inferred from its heterotrophic lifestyle and aerobic metabolism. As a heterotroph, this bacterium likely plays a crucial role in the decomposition of organic matter within its environment, thus contributing to nutrient cycling. Its ability to thrive in a mesophilic temperature range suggests that it may be well-adapted to temperate ecosystems, where it could interact with various organic substrates and other microbial communities. This interaction highlights the importance of Echinicola strongylocentroti in maintaining the balance of microbial ecosystems and facilitating the breakdown of complex organic materials.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusEchinicola
SpeciesEchinicola strongylocentroti
Strainstrain MEBiC08714

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Echinicola strongylocentroti strain MEBiC08714 chromosome,

Gene Summary

Adenine Count

1744517 bp

Thymine Count

1747944 bp

Guanine Count

1384406 bp

Cytosine Count

1375277 bp

Genome Length

6252144 bp

Protein-coding Genes

4741 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gfo/idh/moca family proteinDN752_RS23880Not AvailableNegative6125751 - 612710050122.7
duf1080 domain-containing proteinDN752_RS23885Not AvailableNegative6127225 - 612861051884.4
uxaa family hydrolaseDN752_RS23890Not AvailableNegative6129239 - 613088559067.6
sugar kinaseDN752_RS23900Not AvailablePositive6131283 - 613227836375.3
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseDN752_RS23905Not AvailablePositive6132300 - 613296824132.1
trap transporter substrate-binding proteinDN752_RS23910Not AvailablePositive6132971 - 613397838214.8
trap transporter small permeaseDN752_RS23915Not AvailablePositive6133971 - 613446518514.2
trap transporter large permeaseDN752_RS23920Not AvailablePositive6134468 - 613576345153.6
hypothetical proteinDN752_RS23925Not AvailablePositive6136244 - 613687924948.7
5'/3'-nucleotidase sureDN752_RS23930Not AvailablePositive6137069 - 613784828883.1

Displaying genes 4741 – 4750 of 4820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.