Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytr/algr family response regulator transcription factor | DN752_RS02020 | Not Available | Negative | 522598 - 523014 | 16004.4 |
| efflux rnd transporter permease subunit | DN752_RS02025 | Not Available | Negative | 523347 - 526505 | 114022.0 |
| efflux rnd transporter periplasmic adaptor subunit | DN752_RS02030 | Not Available | Negative | 526547 - 527653 | 40350.0 |
| tolc family protein | DN752_RS02035 | Not Available | Negative | 527676 - 529010 | 51187.8 |
| tetr/acrr family transcriptional regulator | DN752_RS02040 | Not Available | Negative | 529187 - 529762 | 22298.9 |
| haloacid dehalogenase type ii | DN752_RS02045 | Not Available | Negative | 530307 - 530981 | 25760.8 |
| hypothetical protein | DN752_RS02055 | Not Available | Negative | 532215 - 532634 | 16103.5 |
| l-glyceraldehyde 3-phosphate reductase | DN752_RS02060 | Not Available | Positive | 533034 - 534023 | 36856.2 |
| glycoside hydrolase family 9 protein | DN752_RS02065 | Not Available | Negative | 534222 - 535982 | 65078.2 |
| vcbs repeat-containing protein | DN752_RS02070 | Not Available | Negative | 535989 - 539324 | 123440.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
