Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(55) synthase trub | DN752_RS01770 | Not Available | Positive | 471637 - 472311 | 24853.0 |
| bifunctional riboflavin kinase/fad synthetase | DN752_RS01775 | Not Available | Positive | 472308 - 473237 | 35528.6 |
| coa transferase subunit a | DN752_RS01780 | Not Available | Positive | 473285 - 473977 | 25119.4 |
| 3-oxoacid coa-transferase subunit b | DN752_RS01785 | Not Available | Positive | 474072 - 474728 | 23368.0 |
| imma/irre family metallo-endopeptidase | DN752_RS01790 | Not Available | Positive | 475052 - 476191 | 44140.8 |
| duf4411 family protein | DN752_RS01795 | Not Available | Positive | 476188 - 476685 | 19130.6 |
| sulfatase | DN752_RS01800 | Not Available | Negative | 476916 - 478430 | 58280.6 |
| sulfatase | DN752_RS01805 | Not Available | Negative | 478707 - 480140 | 53253.7 |
| dj-1/pfpi family protein | DN752_RS01810 | Not Available | Positive | 480389 - 480967 | 20975.3 |
| sdr family oxidoreductase | DN752_RS01815 | Not Available | Positive | 481075 - 482490 | 53422.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
