Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation nickel metallochaperone hypa | DN752_RS01625 | Not Available | Positive | 441182 - 441529 | 13482.3 |
| hydrogenase nickel incorporation protein hypb | DN752_RS01630 | Not Available | Positive | 441536 - 442237 | 25842.1 |
| carbamoyltransferase hypf | DN752_RS01635 | Not Available | Positive | 442218 - 444482 | 85011.7 |
| hypc/hybg/hupf family hydrogenase formation chaperone | DN752_RS01640 | Not Available | Positive | 444487 - 444768 | 10352.5 |
| hydrogenase formation protein hypd | DN752_RS01645 | Not Available | Positive | 444765 - 445859 | 39909.7 |
| hydrogenase expression/formation protein hype | DN752_RS01650 | Not Available | Positive | 445880 - 446941 | 38131.2 |
| hypothetical protein | DN752_RS01655 | Not Available | Positive | 446945 - 448042 | 40793.6 |
| sulfite exporter taue/safe family protein | DN752_RS01660 | Not Available | Negative | 448031 - 448726 | 25613.9 |
| hypothetical protein | DN752_RS01665 | Not Available | Negative | 449146 - 449790 | 24954.2 |
| hypothetical protein | DN752_RS24655 | Not Available | Negative | 449829 - 449975 | 5465.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
