Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bcr/cfla family multidrug efflux mfs transporter | DN752_RS01580 | Not Available | Positive | 428872 - 430110 | 44420.7 |
| hypothetical protein | DN752_RS24325 | Not Available | Negative | 430386 - 430667 | 10746.8 |
| abc-f family atp-binding cassette domain-containing protein | DN752_RS01585 | Not Available | Positive | 431468 - 433087 | 61192.8 |
| class i sam-dependent rrna methyltransferase | DN752_RS01590 | Not Available | Positive | 433170 - 434351 | 44312.7 |
| formate/nitrite transporter family protein | DN752_RS01595 | Not Available | Negative | 434480 - 435346 | 31612.1 |
| hydrogenase | DN752_RS01600 | Not Available | Positive | 435866 - 436825 | 34895.1 |
| nickel-dependent hydrogenase large subunit | DN752_RS01605 | Not Available | Positive | 436840 - 438435 | 59245.2 |
| hydrogenase maturation protease | DN752_RS01610 | Not Available | Positive | 438508 - 438984 | 17581.3 |
| hypothetical protein | DN752_RS01615 | Not Available | Positive | 438985 - 439296 | 11962.6 |
| hypothetical protein | DN752_RS01620 | Not Available | Positive | 439699 - 441180 | 56949.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
