Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m28 family peptidase | DN752_RS01480 | Not Available | Positive | 405697 - 407187 | 54239.0 |
| glsb/yeaq/ymge family stress response membrane protein | DN752_RS01485 | Not Available | Negative | 407603 - 407869 | 9282.78 |
| duf4097 family beta strand repeat-containing protein | DN752_RS01490 | Not Available | Negative | 408207 - 409157 | 32811.6 |
| tm2 domain-containing protein | DN752_RS01495 | Not Available | Negative | 409147 - 409542 | 14622.8 |
| duf2752 domain-containing protein | DN752_RS01500 | Not Available | Negative | 409535 - 409840 | 11464.6 |
| hypothetical protein | DN752_RS01505 | Not Available | Positive | 410065 - 410964 | 33559.9 |
| gscfa domain-containing protein | DN752_RS01510 | Not Available | Negative | 411107 - 412081 | 37972.6 |
| tyrosine--trna ligase | DN752_RS01515 | Not Available | Positive | 412388 - 413686 | 48457.9 |
| tetr/acrr family transcriptional regulator | DN752_RS01520 | Not Available | Positive | 413975 - 414676 | 27148.3 |
| sdr family nad(p)-dependent oxidoreductase | DN752_RS01525 | Not Available | Positive | 415449 - 416216 | 27386.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
