Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cryptochrome/photolyase family protein | DN752_RS16065 | Not Available | Negative | 4134300 - 4135595 | 50723.6 |
| translocation/assembly module tamb domain-containing protein | DN752_RS24975 | Not Available | Negative | 4135725 - 4137419 | 63504.0 |
| asma-like c-terminal region-containing protein | DN752_RS24980 | Not Available | Negative | 4137422 - 4140424 | 113587.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DN752_RS16075 | Not Available | Positive | 4140431 - 4141438 | 36479.4 |
| ssra-binding protein smpb | DN752_RS16080 | Not Available | Positive | 4141478 - 4141942 | 18084.3 |
| c40 family peptidase | DN752_RS16085 | Not Available | Positive | 4141908 - 4142717 | 30023.3 |
| hnh endonuclease | DN752_RS16090 | Not Available | Positive | 4142720 - 4143235 | 19453.7 |
| trna modification gtpase | DN752_RS16095 | Not Available | Negative | 4143344 - 4144588 | 48421.5 |
| gluconate:h+ symporter | DN752_RS16100 | Not Available | Positive | 4145105 - 4146421 | 46665.1 |
| rida family protein | DN752_RS16105 | Not Available | Positive | 4146603 - 4147064 | 16507.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
