Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DN752_RS15915 | Not Available | Negative | 4098203 - 4099009 | 29817.8 |
| dihydroxy-acid dehydratase | DN752_RS15920 | Not Available | Positive | 4099670 - 4101352 | 59835.9 |
| biosynthetic-type acetolactate synthase large subunit | DN752_RS15925 | Not Available | Positive | 4101495 - 4103189 | 61670.4 |
| acetolactate synthase small subunit | DN752_RS15930 | Not Available | Positive | 4103283 - 4103786 | 19149.2 |
| ketol-acid reductoisomerase | DN752_RS15935 | Not Available | Positive | 4103798 - 4104841 | 38455.4 |
| 3-isopropylmalate dehydratase large subunit | DN752_RS15940 | Not Available | Positive | 4105005 - 4106402 | 50809.8 |
| 3-isopropylmalate dehydratase small subunit | DN752_RS15945 | Not Available | Positive | 4106422 - 4107015 | 22177.1 |
| alpha-isopropylmalate synthase regulatory domain-containing protein | DN752_RS15950 | Not Available | Positive | 4107120 - 4108685 | 58052.6 |
| 3-isopropylmalate dehydrogenase | DN752_RS15955 | Not Available | Positive | 4108757 - 4109824 | 39091.9 |
| crp/fnr family transcriptional regulator | DN752_RS15960 | Not Available | Positive | 4110261 - 4110848 | 22627.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
