Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | DN752_RS15815 | Not Available | Negative | 4067523 - 4068158 | 23437.8 |
| n-acetylmuramoyl-l-alanine amidase | DN752_RS15820 | Not Available | Positive | 4068431 - 4069114 | 25826.1 |
| protease modulator hflc | DN752_RS15825 | Not Available | Negative | 4069481 - 4070419 | 36611.4 |
| ftsh protease activity modulator hflk | DN752_RS15830 | Not Available | Negative | 4070416 - 4071393 | 36892.3 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS15835 | Not Available | Positive | 4071877 - 4075128 | 121305.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS15840 | Not Available | Positive | 4075142 - 4076854 | 64643.1 |
| polysaccharide deacetylase family protein | DN752_RS15845 | Not Available | Positive | 4076962 - 4077762 | 30328.1 |
| glycoside hydrolase family 9 protein | DN752_RS15850 | Not Available | Positive | 4077772 - 4079556 | 66938.3 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | DN752_RS15855 | Not Available | Positive | 4079801 - 4082752 | 108981.0 |
| pqq-binding-like beta-propeller repeat protein | DN752_RS15860 | Not Available | Positive | 4083165 - 4085000 | 67391.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
